RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ARL5AQ9Y689 179 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 U3KQA8 63 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 KDM6BO15054 1643 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 KIF1BO60333 1816 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 CCDC144AA2RUR9 1427 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 TRAV27A0A087WT01 109 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 C17orf112F2Z3M2 114 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 M0R036 132 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 MAGOHP61326 146 aaKnown RBP-0.62□□□□□ -2.51
PCM1-208ENST00000518877 LYRM7Q5U5X0 104 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 CASC2Q6XLA1 102 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 CHCHD1Q96BP2 118 aaKnown RBP-0.62□□□□□ -2.51
PCM1-208ENST00000518877 YPEL2Q96QA6 119 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 ASB4Q9Y574 426 aa-0.62□□□□□ -2.51
PCM1-208ENST00000518877 FLNAP21333 2647 aaKnown RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 CST8O60676 142 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 RPS17P08708 135 aaKnown RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 OR10J4P0C629 311 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 HLA-EP13747 358 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 RAB5CP51148 216 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 DYNLT3P51808 116 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 RPL37P61927 97 aaKnown RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 LSM6P62312 80 aaKnown RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 UBE2BP63146 152 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 MIR22HGQ0VDD5 57 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 COTL1Q14019 142 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 GLYATL3Q5SZD4 288 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 EIF5AL1Q6IS14 154 aaKnown RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 S100A7AQ86SG5 101 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 ANGPTL5Q86XS5 388 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 TRAPPC5Q8IUR0 188 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 OR5D16Q8NGK9 328 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 HYLS1Q96M11 299 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 TCEAL2Q9H3H9 227 aaPredicted RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 PROK2Q9HC23 129 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.63□□□□□ -2.51
PCM1-208ENST00000518877 NCOR1O75376 2440 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 ABCA1O95477 2261 aa-0.63□□□□□ -2.51
PCM1-208ENST00000518877 CEP164Q9UPV0 1460 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 GPR31O00270 319 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 TCRBP04435 133 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 PDE6GP18545 87 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 AESQ08117 197 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 EDDM3AQ14507 147 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 BCL2L15Q5TBC7 163 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 FOXI2Q6ZQN5 318 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 OTUD6BQ8N6M0 293 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 OR4K15Q8NH41 348 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 MALSU1Q96EH3 234 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 CCDC42Q96M95 316 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 TRIM4Q9C037 500 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 HSPB8Q9UJY1 196 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 BOKQ9UMX3 212 aaPredicted RBP-0.64□□□□□ -2.51
PCM1-208ENST00000518877 FAM208BQ5VWN6 2430 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 FMN1Q68DA7 1419 aa-0.64□□□□□ -2.51
PCM1-208ENST00000518877 RBBP6Q7Z6E9 1792 aaKnown RBP-0.65□□□□□ -2.51
PCM1-208ENST00000518877 RTL1A6NKG5 1358 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 TRBV19A0A075B6N1 114 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 CETN3O15182 167 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 IGHV3-33P01772 117 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 CRHP06850 196 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 ERP29P30040 261 aaKnown RBP-0.65□□□□□ -2.51
PCM1-208ENST00000518877 OMPP47874 163 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 PPTC7Q8NI37 304 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 LINC00208Q96KT6 92 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 CFAP53Q96M91 514 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 PARVBQ9HBI1 364 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 CTTNBP2Q8WZ74 1663 aa-0.65□□□□□ -2.51
PCM1-208ENST00000518877 A0A0J9YY99 117 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 DUXBA0A1W2PPF3 345 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 A0A1W2PRS3 328 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 C10orf142B7Z368 130 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 K7ERJ3 54 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 HAND1O96004 215 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 CXCL1P09341 107 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 INSL3P51460 131 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 CAV3P56539 151 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 HIST1H3AP68431 136 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 H3F3AP84243 136 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 MYL5Q02045 173 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 ZNF56Q15929 161 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 ZCCHC23Q6ZST2 131 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 PLEKHB2Q96CS7 222 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 TEX37Q96LM6 180 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 MYO7AQ13402 2215 aa-0.66□□□□□ -2.52
PCM1-208ENST00000518877 TNXBP22105 4242 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 hDV103S1A0JD37 113 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 ODAMA1E959 279 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 ARPP19P56211 112 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 TMEM97Q5BJF2 176 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 C10orf111Q8N326 155 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 LRRC18Q8N456 261 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 ZHX1-C8orf76Q96EF9 292 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 SIGMAR1Q99720 223 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 CADP27708 2225 aa-0.67□□□□□ -2.52
PCM1-208ENST00000518877 N4BP2Q86UW6 1770 aaPredicted RBP-0.68□□□□□ -2.52
PCM1-208ENST00000518877 ADCY9O60503 1353 aa-0.68□□□□□ -2.52
PCM1-208ENST00000518877 MYCBP2O75592 4640 aa-0.68□□□□□ -2.52
PCM1-208ENST00000518877 A0A096LPI6 279 aa-0.68□□□□□ -2.52
PCM1-208ENST00000518877 KRTAP19-7Q3SYF9 63 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms