RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 C12orf57Q99622 126 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 MARCOQ9UEW3 520 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 ARHGEF28Q8N1W1 1705 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 OBSL1O75147 1896 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 CLTCL1P53675 1640 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 RER1O15258 196 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 TSPAN19P0C672 248 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 ZNF25P17030 456 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 CRYGSP22914 178 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 SELENOWP63302 87 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 RELAQ04206 551 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 MOBPQ13875 183 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 TAF9Q16594 264 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 DPPA3Q6W0C5 159 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 Q6ZS52 159 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 C7orf65Q6ZTY9 151 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 OR5H6Q8NGV6 325 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 NAT14Q8WUY8 206 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 NAA38Q9BRA0 125 aaKnown RBP3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 BANF2Q9H503 90 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 MYOM2P54296 1465 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 ERVK-7P63135 1459 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 TNS3Q68CZ2 1445 aa3.26□□□□□ -1.89
CTNNA1-202ENST00000517533 CLTCQ00610 1675 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 SCAF11Q99590 1463 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 NLRP1Q9C000 1473 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 IGKV2D-24A0A075B6R9 120 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 A0A0J9YX75 114 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 TRBV27A0A0K0K1C4 114 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 TRBV10-2A0A0K0K1G8 114 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 SMIM24O75264 130 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 MT-ND6P03923 174 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 TCRAP04437 139 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 NFYAP23511 347 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 FOXA3P55318 350 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 EBI3Q14213 229 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 DIAPH2-AS1Q14236 149 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 SLC35E3Q7Z769 313 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 HMGN2P46Q86SG4 172 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 CTAGE3PQ8IX95 158 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 OR4S1Q8NGB4 309 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 OR5A2Q8NGI9 324 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 ZNF418Q8TF45 676 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 UGGT1Q9NYU2 1555 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 PTPRSQ13332 1948 aa3.25□□□□□ -1.89
CTNNA1-202ENST00000517533 MYO10Q9HD67 2058 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 ADGRB3O60242 1522 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 PREX1Q8TCU6 1659 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 A2ML1A8K2U0 1454 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 NRXN1Q9ULB1 1477 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 PIK3C2BO00750 1634 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 LAMC1P11047 1609 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 TRPM1Q7Z4N2 1603 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 A0A0D9SG52 128 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 C7orf71A4D174 169 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 J3QR89 54 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 TIMM17BO60830 172 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 IFNGP01579 166 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 CSRP1P21291 193 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 MYL5Q02045 173 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 EMX2Q04743 252 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 HES1Q14469 280 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 HSD17B12Q53GQ0 312 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 LCN15Q6UWW0 184 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 WFDC11Q8NEX6 87 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 OR5D16Q8NGK9 328 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 TMEM203Q969S6 136 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 MRPS24Q96EL2 167 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 CYYR1Q96J86 154 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 PRELID3AQ96N28 172 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 PKMYT1Q99640 499 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 BCL2L10Q9HD36 194 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 DISP2A7MBM2 1401 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 FAM135BQ49AJ0 1406 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 KTN1Q86UP2 1357 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 RTL9Q8NET4 1388 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 TMEM2Q9UHN6 1383 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 MROH2AA6NES4 1674 aa3.24□□□□□ -1.89
CTNNA1-202ENST00000517533 EML6Q6ZMW3 1958 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 TMEM131LA2VDJ0 1609 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 MADDQ8WXG6 1647 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 IGHV1-18A0A0C4DH31 117 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 ZNF727A8MUV8 499 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 NPFFO15130 113 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 PHLPP1O60346 1717 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 FXYD2P54710 66 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 COPZ1P61923 177 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 Q6ZQT0 140 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 MORN4Q8NDC4 146 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 SETBP1Q9Y6X0 1596 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 PIK3C2AO00443 1686 aa3.23□□□□□ -1.89
CTNNA1-202ENST00000517533 RIC1Q4ADV7 1423 aa3.22□□□□□ -1.89
CTNNA1-202ENST00000517533 SMG6Q86US8 1419 aaKnown RBP3.22□□□□□ -1.89
CTNNA1-202ENST00000517533 SDCBPO00560 298 aaPredicted RBP3.22□□□□□ -1.89
CTNNA1-202ENST00000517533 SYNGR2O43760 224 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms