RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 IER3IP1Q9Y5U9 82 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCDC88AQ3V6T2 1871 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KIDINS220Q9ULH0 1771 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RIC1Q4ADV7 1423 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NSD3Q9BZ95 1437 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GREB1Q4ZG55 1949 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ALPK3Q96L96 1907 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MYO9BQ13459 2157 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KIF20BQ96Q89 1820 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ADGRL2O95490 1459 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CFTRP13569 1480 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ABCC10Q5T3U5 1492 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCDC18Q5T9S5 1454 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SCAF11Q99590 1463 aaKnown RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 BAZ1BQ9UIG0 1483 aaKnown RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CEP164Q9UPV0 1460 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZFC3H1O60293 1989 aaKnown RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SCN9AQ15858 1988 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TANC2Q9HCD6 1990 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RIMBP3CA6NJZ7 1639 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RIMBP3BA6NNM3 1639 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PLXNA3P51805 1871 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KTN1Q86UP2 1357 aaKnown RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IBTKQ9P2D0 1353 aaPredicted RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RIMBP3Q9UFD9 1639 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRPM6Q9BX84 2022 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SCN3AQ9NY46 2000 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCDC88CQ9P219 2028 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 COL18A1P39060 1754 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ERICH3Q5RHP9 1530 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DLC1Q96QB1 1528 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGLV10-54A0A075B6I4 117 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRAV30A0A087WSZ9 112 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRAV27A0A087WT01 109 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGHV3-15A0A0B4J1V0 119 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 A0A0D9SG52 128 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 A0A0J9YW62 118 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PNMA8CA0A1B0GUJ8 204 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM218A2RU14 115 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM235A6NFC5 223 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SDHAF1A6NFY7 115 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF727A8MUV8 499 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C1orf196B1AJZ1 125 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 H3BMG7 143 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 H3BMM0 161 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 M0R143 59 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 UQCRQO14949 82 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LECT2O14960 151 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SLC25A20O43772 301 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NAPSAO96009 420 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HRASP01112 189 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TNFP01375 233 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1D-33P01593 117 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1-33P01594 117 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGHV1-69P01742 117 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AKAIN1P0CW23 69 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00694P0DN24 101 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCL3P10147 92 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 COX6A1P12074 109 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FABP2P12104 132 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCL5P13501 91 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HIST1H1BP16401 226 aaKnown RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 XCL1P47992 114 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AKR1D1P51857 326 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FOXA1P55317 472 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DEFA3P59666 94 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RHOGP84095 191 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ASB16-AS1Q495Z4 193 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LDLRAD2Q5SZI1 272 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC01545Q5VT33 79 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM244Q5VVB8 128 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 EIF5AL1Q6IS14 154 aaKnown RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF322Q6U7Q0 402 aaPredicted RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GLIPR1L1Q6UWM5 242 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LCN15Q6UWW0 184 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IZUMO2Q6UXV1 221 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF705AQ6ZN79 300 aaPredicted RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C7orf65Q6ZTY9 151 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GTF2H5Q6ZYL4 71 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AAED1Q7RTV5 226 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SPATA12Q7Z6I5 190 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TEN1Q86WV5 123 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SIGLECL1Q8N7X8 197 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CNEP1R1Q8N9A8 125 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZFP62Q8NB50 900 aaPredicted RBP0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR10P1Q8NGE3 313 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR4B1Q8NGF8 309 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR8D4Q8NGM9 314 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR5C1Q8NGR4 320 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MUC7Q8TAX7 377 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 WFDC5Q8TCV5 224 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DCANP1Q8TF63 244 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 BRK1Q8WUW1 75 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SFT2D1Q8WV19 159 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FGF13Q92913 245 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DIRC1Q969H9 104 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 UBE2WQ96B02 151 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PRELID3AQ96N28 172 aa0.61□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SDF2Q99470 211 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms