RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 C5orf46Q6UWT4 87 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 BOD1L2Q8IYS8 172 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 UBL4BQ8N7F7 174 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 KLK6Q92876 244 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 COA4Q9NYJ1 87 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 SBF2Q86WG5 1849 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 ARFGEF1Q9Y6D6 1849 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 ARAP1Q96P48 1450 aa-3.41□□□□□ -2.95
RNU6-542P-201ENST00000516405 TRAV12-2A0A075B6T6 113 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 BICDL2A1A5D9 508 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 OR4C46A6NHA9 309 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 C17orf112F2Z3M2 114 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 CFL1P23528 166 aaKnown RBP-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 PSMB6P28072 239 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 PHBP35232 272 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 GLRXP35754 106 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 PSMD7P51665 324 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 GPM6BQ13491 265 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 PIGYQ3MUY2 71 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 CLEC6AQ6EIG7 209 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 OR4K15Q8NH41 348 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 FAM81AQ8TBF8 368 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 TMEM141Q96I45 108 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 HIST1H2BLQ99880 126 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 WDR61Q9GZS3 305 aaKnown RBP-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 TREM1Q9NP99 234 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 COMMD9Q9P000 198 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 GCNT4Q9P109 453 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 V9GYY9 64 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 KIF15Q9NS87 1388 aa-3.41□□□□□ -2.96
RNU6-542P-201ENST00000516405 PHIPQ8WWQ0 1821 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 FMN1Q68DA7 1419 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 A8MWV9 139 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 COX4I1P13073 169 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 PSMD4P55036 377 aaKnown RBP-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 OR10A3P58181 314 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 VSNL1P62760 191 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 HACD4Q5VWC8 232 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 ULK3Q6PHR2 472 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 MT1MQ8N339 61 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 GRPEL2Q8TAA5 225 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 TMEM208Q9BTX3 173 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 MROQ9BYG7 248 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 ARL5AQ9Y689 179 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 PXMP4Q9Y6I8 212 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 PRUNE2Q8WUY3 3088 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 ERCC6L2Q5T890 1561 aa-3.42□□□□□ -2.96
RNU6-542P-201ENST00000516405 ANKRD50Q9ULJ7 1429 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 ANKRD31Q8N7Z5 1873 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 GOLGA8MH3BSY2 632 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 PIN1P1O15428 100 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 OR2J2O76002 312 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 LINC00614P0C842 121 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 ACOT6Q3I5F7 207 aaPredicted RBP-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 H1FX-AS1Q4G0G2 97 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 CENPQQ7L2Z9 268 aaPredicted RBP-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 TRAPPC6BQ86SZ2 158 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 FUNDC1Q8IVP5 155 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 YPEL2Q96QA6 119 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 CIB1Q99828 191 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 MAP1LC3CQ9BXW4 147 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 CCDC90BQ9GZT6 254 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 METTL8Q9H825 291 aaKnown RBP-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 IFT46Q9NQC8 304 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 CMTM6Q9NX76 183 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 BET1LQ9NYM9 111 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 SLC22A13Q9Y226 551 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 A0A1W2PP64 1363 aa-3.43□□□□□ -2.96
RNU6-542P-201ENST00000516405 NSD3Q9BZ95 1437 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 PARP14Q460N5 1801 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 LRRN3E7EW58 273 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 H0YCG3 227 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 FABP9Q0Z7S8 132 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 MRPL30Q8TCC3 161 aaKnown RBP-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 ARL5BQ96KC2 179 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 HYLS1Q96M11 299 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 FBXO44Q9H4M3 255 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 RGCCQ9H4X1 137 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 COMMD3Q9UBI1 195 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 AQRO60306 1485 aaKnown RBP eCLIP-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 IFT172Q9UG01 1749 aa-3.44□□□□□ -2.96
RNU6-542P-201ENST00000516405 NUP210LQ5VU65 1888 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 PAPPA2Q9BXP8 1791 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 A0A087X0T9 212 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 C9orf92A6NGG3 77 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 hCG_2039718K7EN88 272 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 HMMRO75330 724 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 CIB2O75838 187 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 UBE2KP61086 200 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 ERVS71-1P61550 626 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 BEX3Q00994 111 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 KRR1Q13601 381 aaKnown RBP-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 DGCR14Q96DF8 476 aaKnown RBP-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 C19orf60Q96EN9 201 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 IQCGQ9H095 443 aaKnown RBP-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 TMBIM4Q9HC24 238 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 AHSPQ9NZD4 102 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 BLOC1S6Q9UL45 172 aa-3.45□□□□□ -2.96
RNU6-542P-201ENST00000516405 FMN2Q9NZ56 1722 aa-3.45□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms