RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 SNRPD3P62318 126 aaKnown RBP-3.54□□□□□ -2.98
SNORA40.13-201ENST00000516379 S100A7AQ86SG5 101 aa-3.54□□□□□ -2.98
SNORA40.13-201ENST00000516379 FUNDC1Q8IVP5 155 aa-3.54□□□□□ -2.98
SNORA40.13-201ENST00000516379 POP5Q969H6 163 aaKnown RBP-3.54□□□□□ -2.98
SNORA40.13-201ENST00000516379 HIGD1CA8MV81 97 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 C9JAW5 83 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 S100A4P26447 101 aaKnown RBP-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 SRIP30626 198 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 EMX2Q04743 252 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 HLA-DRB5Q30154 266 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 CLEC2AQ6UVW9 174 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 LINC00523Q86TU6 105 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 BOD1L2Q8IYS8 172 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 KLK6Q92876 244 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 IQCGQ9H095 443 aaKnown RBP-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 C11orf68Q9H3H3 251 aaKnown RBP-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 FBXL12Q9NXK8 326 aa-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 RABL2AQ9UBK7 228 aaPredicted RBP-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 NOSIPQ9Y314 301 aaKnown RBP-3.55□□□□□ -2.98
SNORA40.13-201ENST00000516379 CXCR6O00574 342 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 CASQ2O14958 399 aaPredicted RBP-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 STX10O60499 249 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 FAM74A4Q5TZK3 123 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 CSAG1Q6PB30 78 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 PDCL2Q8N4E4 241 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 DEFB125Q8N687 156 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 POPDC3Q9HBV1 291 aa-3.56□□□□□ -2.98
SNORA40.13-201ENST00000516379 GCN1Q92616 2671 aaKnown RBP-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 A0A1W2PPV4 95 aa-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 PVALBP20472 110 aaPredicted RBP-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 NUP98P52948 1817 aa-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 COQ5Q5HYK3 327 aa-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 C1orf140Q5VVS0 124 aa-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 KIAA1549LQ6ZVL6 1849 aa-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 DKKL1Q9UK85 242 aa-3.57□□□□□ -2.98
SNORA40.13-201ENST00000516379 ATAD2BQ9ULI0 1458 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 NBEAQ8NFP9 2946 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 SYNJ2BP-COX16A0A087WUM0 186 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 TRAV17A0A0B4J275 112 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 GSTTP1A0A1W2PQM5 241 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 DEFB135Q30KP9 77 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 DEFB112Q30KQ8 113 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 C6orf183Q5T699 404 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 PDZD9Q8IXQ8 264 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 GRPEL2Q8TAA5 225 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 HYLS1Q96M11 299 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 DERL2Q9GZP9 239 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 MS4A6AQ9H2W1 248 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 FAM96AQ9H5X1 160 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 ARL5AQ9Y689 179 aa-3.58□□□□□ -2.98
SNORA40.13-201ENST00000516379 CEP295Q9C0D2 2601 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 IGF2P01344 180 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 ISG15P05161 165 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 SPRR1BP22528 89 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 H3F3AP84243 136 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 SYCP1Q15431 976 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 Q6ZRX8 168 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 SREK1IP1Q8N9Q2 155 aaPredicted RBP-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 RBP7Q96R05 134 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 TMEM126AQ9H061 195 aa-3.59□□□□□ -2.98
SNORA40.13-201ENST00000516379 AKAP11Q9UKA4 1901 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 LDOC1O95751 146 aaPredicted RBP-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 OR10J4P0C629 311 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 SULT1A1P50225 295 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 RAB5CP51148 216 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 FAM45BPQ6NSW5 357 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 DHRS9Q9BPW9 319 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 OR51I2Q9H344 312 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 ENPP5Q9UJA9 477 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 NEO1Q92859 1461 aa-3.6□□□□□ -2.99
SNORA40.13-201ENST00000516379 CASZ1Q86V15 1759 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 A0A1B0GW15 77 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 EXOC1LA0A1B0GW35 172 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 MKRN2OSH3BPM6 223 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 HLA-DRAP01903 254 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 IL3P08700 152 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 UGT2B7P16662 529 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 HAMPP81172 84 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 VAMP3Q15836 100 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 NEDD8Q15843 81 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 DNAL1Q4LDG9 190 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 RNASEH2CQ8TDP1 164 aaKnown RBP-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 C19orf60Q96EN9 201 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 DIRAS2Q96HU8 199 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 CYSLTR1Q9Y271 337 aa-3.61□□□□□ -2.99
SNORA40.13-201ENST00000516379 A0A1B0GTQ1 180 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 OR4C46A6NHA9 309 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 MPHOSPH10O00566 681 aaKnown RBP-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 RHOBP62745 196 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 LRRC18Q8N456 261 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 TMEM161BQ8NDZ6 487 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 ZHX1-C8orf76Q96EF9 292 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 ASCL3Q9NQ33 180 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 TMEM242Q9NWH2 141 aa-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 MRPL36Q9P0J6 103 aaKnown RBP-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 CDK12Q9NYV4 1490 aaPredicted RBP-3.62□□□□□ -2.99
SNORA40.13-201ENST00000516379 DUXBA0A1W2PPF3 345 aa-3.63□□□□□ -2.99
SNORA40.13-201ENST00000516379 C1orf196B1AJZ1 125 aa-3.63□□□□□ -2.99
SNORA40.13-201ENST00000516379 NDUFB3O43676 98 aa-3.63□□□□□ -2.99
SNORA40.13-201ENST00000516379 PYYP10082 97 aa-3.63□□□□□ -2.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms