RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 A0A1B0GWJ7 208 aa11.65□□□□□ -0.55
TRIO-222ENST00000515144 TCRAP04437 139 aa11.65□□□□□ -0.55
TRIO-222ENST00000515144 TRAV2A0A0B4J234 112 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 SSBP2P81877 361 aaPredicted RBP11.64□□□□□ -0.55
TRIO-222ENST00000515144 DAZ1Q9NQZ3 744 aaKnown RBP11.64□□□□□ -0.55
TRIO-222ENST00000515144 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 PKIAP61925 76 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 DEFB112Q30KQ8 113 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 CLPSL2Q6UWE3 100 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 IGLV2-23P01705 113 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 FABP2P12104 132 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 ATG2AQ2TAZ0 1938 aa11.64□□□□□ -0.55
TRIO-222ENST00000515144 TRBV9A0A0B4J1U6 114 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
TRIO-222ENST00000515144 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
TRIO-222ENST00000515144 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
TRIO-222ENST00000515144 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
TRIO-222ENST00000515144 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 NTF4P34130 210 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 ZNF524Q96C55 264 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 Q6ZR03 302 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 ADMP35318 185 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 C1QTNF4Q9BXJ3 329 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 ZNF138P52744 262 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 DIAPH2-AS1Q14236 149 aa11.63□□□□□ -0.55
TRIO-222ENST00000515144 RSPO3Q9BXY4 272 aaPredicted RBP11.63□□□□□ -0.55
TRIO-222ENST00000515144 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
TRIO-222ENST00000515144 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 COL5A1-AS1Q5SY13 56 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 C1orf159Q96HA4 380 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 GAGE10A6NGK3 116 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 TYMSP04818 313 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 OCC1Q8TAD7 63 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 A0A1W2PPI3 338 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 SRSF1Q07955 248 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRIO-222ENST00000515144 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 OOSP1A8MZH6 123 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 GAGE7O76087 117 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
TRIO-222ENST00000515144 FOXL1Q12952 345 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 NHLRC3Q5JS37 347 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 SLC25A34Q6PIV7 304 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 TPSG1Q9NRR2 321 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 SRSF3P84103 164 aaKnown RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 CCL24O00175 119 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 CEACAM8P31997 349 aaPredicted RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 SH2D1AO60880 128 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 IGHV4-38-2P0DP08 117 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 HOXB4P17483 251 aaPredicted RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 APOC4P55056 127 aa11.61□□□□□ -0.55
TRIO-222ENST00000515144 RPL23P62829 140 aaKnown RBP11.61□□□□□ -0.55
TRIO-222ENST00000515144 SRP19P09132 144 aaKnown RBP11.6□□□□□ -0.55
TRIO-222ENST00000515144 PAX9P55771 341 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 SHISA9B4DS77 424 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 TOMM40O96008 361 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 IGKV1-5P01602 117 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 C8orf86Q6ZUL3 223 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 OR5A1Q8NGJ0 315 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 TRGV9Q99603 122 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 IFT22Q9H7X7 185 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 CHTOPQ9Y3Y2 248 aaKnown RBP11.6□□□□□ -0.55
TRIO-222ENST00000515144 PIEZO2Q9H5I5 2752 aa11.6□□□□□ -0.55
TRIO-222ENST00000515144 IGLV3-9A0A075B6K5 115 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 NDUFB8O95169 186 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 NAV3Q8IVL0 2385 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 MMP23AO75900 390 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 SMIM13P0DJ93 91 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 PLA2G5P39877 138 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 IGF2BP2-AS1Q96M15 143 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 CCL20P78556 96 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 DERL1Q9BUN8 251 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 C8orf49Q96NF6 230 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 BTCP35070 178 aa11.59□□□□□ -0.55
TRIO-222ENST00000515144 RNF222A6NCQ9 220 aa11.58□□□□□ -0.56
TRIO-222ENST00000515144 TSPAN13O95857 204 aa11.58□□□□□ -0.56
TRIO-222ENST00000515144 F2Z2F3 143 aa11.58□□□□□ -0.56
TRIO-222ENST00000515144 MST1LQ2TV78 715 aa11.58□□□□□ -0.56
TRIO-222ENST00000515144 AZU1P20160 251 aa11.58□□□□□ -0.56
TRIO-222ENST00000515144 PLP1P60201 277 aa11.58□□□□□ -0.56
TRIO-222ENST00000515144 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
TRIO-222ENST00000515144 TSSC4Q9Y5U2 329 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms