RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 KLRB1Q12918 225 aa12.87□□□□□ -0.35
CDH6-205ENST00000514738 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
CDH6-205ENST00000514738 TPSG1Q9NRR2 321 aa12.87□□□□□ -0.35
CDH6-205ENST00000514738 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
CDH6-205ENST00000514738 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
CDH6-205ENST00000514738 UTRNP46939 3433 aa12.87□□□□□ -0.35
CDH6-205ENST00000514738 OVCA2Q8WZ82 227 aa12.86□□□□□ -0.35
CDH6-205ENST00000514738 NXT2Q9NPJ8 142 aaKnown RBP12.86□□□□□ -0.35
CDH6-205ENST00000514738 LRRK1Q38SD2 2015 aa12.86□□□□□ -0.35
CDH6-205ENST00000514738 PRSS46E5RG02 174 aa12.86□□□□□ -0.35
CDH6-205ENST00000514738 LY6LH3BQJ8 138 aa12.86□□□□□ -0.35
CDH6-205ENST00000514738 TRAV17A0A0B4J275 112 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 PRSS1P07477 247 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 TWIST1Q15672 202 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 C20orf204Q6ZNR8 217 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 SRRM4A7MD48 611 aaKnown RBP12.85□□□□□ -0.35
CDH6-205ENST00000514738 HLA-DMBP28068 263 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 PRR20EP86478 221 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 PRR20CP86479 221 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 PRR20DP86480 221 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 PRR20BP86481 221 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 PRR20AP86496 221 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
CDH6-205ENST00000514738 NCBP2LA6PVI3 153 aaKnown RBP12.84□□□□□ -0.35
CDH6-205ENST00000514738 ZNF883P0CG24 379 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 DRAM1Q8N682 238 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 INS-IGF2F8WCM5 200 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 H3BMM0 161 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 PRSS12P56730 875 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 MDP1Q86V88 176 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 NDUFA11Q86Y39 141 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 UBE2WQ96B02 151 aa12.84□□□□□ -0.35
CDH6-205ENST00000514738 MKXQ8IYA7 352 aa12.83□□□□□ -0.35
CDH6-205ENST00000514738 H3BML4 177 aa12.83□□□□□ -0.36
CDH6-205ENST00000514738 PRDX2P32119 198 aa12.83□□□□□ -0.36
CDH6-205ENST00000514738 PLGLB1Q02325 96 aa12.83□□□□□ -0.36
CDH6-205ENST00000514738 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
CDH6-205ENST00000514738 ADAMTS20P59510 1910 aa12.83□□□□□ -0.36
CDH6-205ENST00000514738 TRAV40A0A0B4J280 105 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 CXorf51AA0A1B0GTR3 108 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 COX6A1P12074 109 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 RTL8AQ9BWD3 113 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 A0A1B0GUT8 65 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 D6R8Y8 96 aa12.82□□□□□ -0.36
CDH6-205ENST00000514738 TSACCQ96A04 125 aaPredicted RBP12.82□□□□□ -0.36
CDH6-205ENST00000514738 HERVK_113P61574 105 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 Q6ZT83 130 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 AAED1Q7RTV5 226 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 PLXDC1Q8IUK5 500 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 MAFAQ8NHW3 353 aaPredicted RBP12.81□□□□□ -0.36
CDH6-205ENST00000514738 FOXC2Q99958 501 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 MLST8Q9BVC4 326 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 AGPAT4-IT1Q9H0P7 198 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 MED12Q93074 2177 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 COL5A1P20908 1838 aaPredicted RBP12.81□□□□□ -0.36
CDH6-205ENST00000514738 TIRAPP58753 221 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 ZNF329Q86UD4 541 aa12.81□□□□□ -0.36
CDH6-205ENST00000514738 TRAV41A0A0B4J266 112 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 A0A1W2PPC4 97 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 RIGQ13278 110 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 LINC01600Q96MT4 127 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 SHANK2-AS3Q9BTD1 123 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 SLC25A16P16260 332 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
CDH6-205ENST00000514738 LINC00311Q8N616 119 aa12.8□□□□□ -0.36
CDH6-205ENST00000514738 TGFBR3LH3BV60 316 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 M0R135 149 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 OVOL3O00110 214 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 DLL1O00548 723 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 ARMS2P0C7Q2 107 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
CDH6-205ENST00000514738 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 ZNF799Q96GE5 643 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 XIRP2A4UGR9 3374 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 ZNF785A8K8V0 405 aa12.79□□□□□ -0.36
CDH6-205ENST00000514738 A0A0U1RQV1 116 aa12.78□□□□□ -0.36
CDH6-205ENST00000514738 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
CDH6-205ENST00000514738 CDSNQ15517 529 aa12.78□□□□□ -0.36
CDH6-205ENST00000514738 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
CDH6-205ENST00000514738 TMEM178BH3BS89 294 aa12.77□□□□□ -0.36
CDH6-205ENST00000514738 ZNF22P17026 224 aaPredicted RBP12.77□□□□□ -0.36
CDH6-205ENST00000514738 C3orf36Q3SXR2 165 aa12.77□□□□□ -0.36
CDH6-205ENST00000514738 COX14Q96I36 57 aa12.77□□□□□ -0.36
CDH6-205ENST00000514738 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.36
CDH6-205ENST00000514738 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.36
CDH6-205ENST00000514738 U3KQK5 164 aa12.77□□□□□ -0.36
CDH6-205ENST00000514738 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.37
CDH6-205ENST00000514738 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.37
CDH6-205ENST00000514738 ZNF561-AS1K7EIQ3 104 aa12.76□□□□□ -0.37
CDH6-205ENST00000514738 C20orf173Q96LM9 149 aa12.76□□□□□ -0.37
CDH6-205ENST00000514738 MRPL35Q9NZE8 188 aaKnown RBP12.76□□□□□ -0.37
CDH6-205ENST00000514738 TRBV6-6A0A0A6YYG2 114 aa12.76□□□□□ -0.37
CDH6-205ENST00000514738 ERVK-16P61578 105 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms