RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TRGV3P03979 118 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 CREBBPQ92793 2442 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 CHAC1Q9BUX1 264 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 SIGLEC9Q9Y336 463 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 NOTCH3Q9UM47 2321 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 WT1-ASQ06250 92 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 FAM231DQ6ZW35 169 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 FAM57AQ8TBR7 257 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 RNF138Q8WVD3 245 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 CACNA1BQ00975 2339 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 CNTFRP26992 372 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 C8orf49Q96NF6 230 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 GFRA4Q9GZZ7 299 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 DKK1O94907 266 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 IGLV2-14P01704 120 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 LINC00173Q6ZV60 143 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 RNASE6Q93091 150 aaKnown RBP6.26□□□□□ -1.41
CLCN3-209ENST00000513761 TMEM178BH3BS89 294 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 K7EP13 123 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 LAGE3Q14657 143 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 COX8AP10176 69 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 ADIPOQQ15848 244 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 TMEM249Q2WGJ8 235 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 TPSG1Q9NRR2 321 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 CEP350Q5VT06 3117 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 COL6A6A6NMZ7 2263 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV3-11P01762 117 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 RHOGP84095 191 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV4-39P01824 125 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 WFDC12Q8WWY7 111 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 FXYD5Q96DB9 178 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 PLCE1Q9P212 2302 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 PCDH15Q96QU1 1955 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV3-64A0A075B6Q5 118 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 H3BRM9 83 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 ZNF492Q9P255 531 aa6.25□□□□□ -1.41
CLCN3-209ENST00000513761 MED13Q9UHV7 2174 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 TRAV40A0A0B4J280 105 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 KLRD1Q13241 179 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 DIAPH2-AS1Q14236 149 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 KRTAP27-1Q3LI81 207 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 ZNF474Q6S9Z5 364 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-209ENST00000513761 GTF3C1Q12789 2109 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 OBSL1O75147 1896 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 CD59P13987 128 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 CKS1BP61024 79 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 MORN5Q5VZ52 161 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 ZC2HC1AQ96GY0 325 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 DOPEY2Q9Y3R5 2298 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 ZNF295-AS1Q8N0V1 137 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 LINC00527Q9UJ94 153 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 CEACAM4O75871 244 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 TRAV2A0A0B4J234 112 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-209ENST00000513761 ERCC8Q13216 396 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 CT83Q5H943 113 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 C11orf53Q8IXP5 236 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 ABHD17AQ96GS6 310 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 GEMIN7Q9H840 131 aaKnown RBP6.24□□□□□ -1.41
CLCN3-209ENST00000513761 SMPXQ9UHP9 88 aa6.24□□□□□ -1.41
CLCN3-209ENST00000513761 CDKN1BP46527 198 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 SLC50A1Q9BRV3 221 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV2-70DA0A0C4DH43 119 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 PSMB11A5LHX3 300 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 TMEM8BA6NDV4 472 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 K7ERJ3 54 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 FAM104BQ5XKR9 115 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 TEX29Q8N6K0 151 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 SHANK2-AS3Q9BTD1 123 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 SIGLEC8Q9NYZ4 499 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 KMT2EQ8IZD2 1858 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 A8MWV9 139 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 TSPAN13O95857 204 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 PPP1R17O96001 155 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 C15orf32Q32M92 178 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 HAX1O00165 279 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 ETDBQ3ZM63 59 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 FAM106AQ4KMX7 169 aa6.23□□□□□ -1.41
CLCN3-209ENST00000513761 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-209ENST00000513761 MALRD1Q5VYJ5 2156 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 BUB1B-PAK6H3BSN5 160 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 K7EP34 96 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 SRD5A1P18405 259 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 PRTN3P24158 256 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
CLCN3-209ENST00000513761 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 TNFRSF14Q92956 283 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 MRAP2Q96G30 205 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 PRR14LQ5THK1 2151 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 CD7P09564 240 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 NDPQ00604 133 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 NDUFS8O00217 210 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms