RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CANT1Q8WVQ1 401 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 SLC35B4Q969S0 331 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 CCL19Q99731 98 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 PRADC1Q9BSG0 188 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 GGACTQ9BVM4 153 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 CCDC90BQ9GZT6 254 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 IMP3Q9NV31 184 aaKnown RBP-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 FBXO5Q9UKT4 447 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 CYSLTR1Q9Y271 337 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 FRYQ5TBA9 3013 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 DMXL1Q9Y485 3027 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 ADGRG4Q8IZF6 3080 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 C5orf42Q9H799 3197 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 ABCC11Q96J66 1382 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 BCL9O00512 1426 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 KDM6AO15550 1401 aaPredicted RBP-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 SPTA1P02549 2419 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 HECW1Q76N89 1606 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 COL24A1Q17RW2 1714 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 WDFY3Q8IZQ1 3526 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 SPTBN5Q9NRC6 3674 aaKnown RBP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 CSPG4Q6UVK1 2322 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 SPG11Q96JI7 2443 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 DCHS2Q6V1P9 2916 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 OR4C46A6NHA9 309 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 HSBP1L1C9JCN9 74 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 LRRN3E7EW58 273 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 CYB5BO43169 146 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 LY6G6CO95867 125 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 OR5G3P0C626 314 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 OCM2P0CE71 109 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 SMIM17P0DL12 118 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 C8orf88P0DMB2 117 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 CXCL8P10145 99 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 PSMB6P28072 239 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 AP2S1P53680 142 aaPredicted RBP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 DEFA3P59666 94 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 RAB5BP61020 215 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 PSME3P61289 254 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 EIF5AP63241 154 aaKnown RBP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 KRTAP6-2Q3LI66 62 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 OCIAD2Q56VL3 154 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 C8orf74Q6P047 294 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 CASC2Q6XLA1 102 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 ZNF833PQ6ZTB9 187 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 Q8TAT8 98 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 FAM172AQ8WUF8 416 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 LYSMD1Q96S90 227 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 TCEAL2Q9H3H9 227 aaPredicted RBP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 LY96Q9Y6Y9 160 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 U3KQA8 63 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 MED1Q15648 1581 aaPredicted RBP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 BCORL1Q5H9F3 1711 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 MED13LQ71F56 2210 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 PDE4DIPQ5VU43 2346 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 PRUNE2Q8WUY3 3088 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 HTTP42858 3142 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 CEP350Q5VT06 3117 aa-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 MKI67P46013 3256 aaKnown RBP-0.25□□□□□ -2.45
PDGFC-208ENST00000512711 REV3LO60673 3130 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 PI4KAP42356 2102 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 RIMBP3CA6NJZ7 1639 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 RIMBP3BA6NNM3 1639 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 RIMBP3Q9UFD9 1639 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 ARHGEF11O15085 1522 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 WRNQ14191 1432 aaPredicted RBP eCLIP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 TRAV26-2A0A0B4J265 109 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 E7EUB6 86 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 M0R233 179 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 SLC16A4O15374 487 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 RBP1P09455 135 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 SMIM10L2AP0DMW4 78 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 SMIM10L2BP0DMW5 78 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 CD79AP11912 226 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 HIST1H1TP22492 207 aaPredicted RBP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 SRP14P37108 136 aaKnown RBP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 DSCR4P56555 118 aaPredicted RBP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 CDK6Q00534 326 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 CLEC6AQ6EIG7 209 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 FAM9CQ8IZT9 166 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 OR10K1Q8NGX5 313 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 FAM213BQ8TBF2 198 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 RAB37Q96AX2 223 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 MUCL1Q96DR8 90 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 ADAT3Q96EY9 351 aaPredicted RBP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 DCUN1D1Q96GG9 259 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 OR52E6Q96RD3 313 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 SLC25A21Q9BQT8 299 aaPredicted RBP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 PBOV1Q9GZY1 135 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 UCK1Q9HA47 277 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 BOKQ9UMX3 212 aaPredicted RBP-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 CFAP47Q6ZTR5 3102 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 PTPRQQ9UMZ3 2332 aa-0.26□□□□□ -2.45
PDGFC-208ENST00000512711 MGAMO43451 1857 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 OBSL1O75147 1896 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 ATMQ13315 3056 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 HECW2Q9P2P5 1572 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 SPTAN1Q13813 2472 aaKnown RBP-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms