RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 MGAM2Q2M2H8 2515 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 A0A087X0K7 114 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 TRAV25A0A0B4J276 109 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 DNASE2O00115 360 aaPredicted RBP8.23□□□□□ -1.09
PFDN1-204ENST00000512707 EIF3GO75821 320 aaKnown RBP eCLIP8.23□□□□□ -1.09
PFDN1-204ENST00000512707 PSG9Q00887 426 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 C9orf66Q5T8R8 295 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 LCN12Q6JVE5 192 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 OR2K2Q8NGT1 345 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 LYPD6BQ8NI32 183 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 BLNKQ8WV28 456 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 PCNPQ8WW12 178 aaKnown RBP8.23□□□□□ -1.09
PFDN1-204ENST00000512707 FXYD5Q96DB9 178 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 SLC50A1Q9BRV3 221 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 NKX6-2Q9C056 277 aaPredicted RBP8.23□□□□□ -1.09
PFDN1-204ENST00000512707 AAMDCQ9H7C9 122 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 NRN1Q9NPD7 142 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 MLXQ9UH92 298 aa8.23□□□□□ -1.09
PFDN1-204ENST00000512707 TRBV19A0A075B6N1 114 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 ZNF253O75346 499 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 IGLC2P0DOY2 106 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 ID1P41134 155 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 LYPD1Q8N2G4 141 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 TXNDC17Q9BRA2 123 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 CLEC5AQ9NY25 188 aa8.22□□□□□ -1.09
PFDN1-204ENST00000512707 IGKV3-7A0A075B6H7 116 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 A0A1W2PRE2 83 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 OR4C46A6NHA9 309 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 UBE2G2P60604 165 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 SNRPD3P62318 126 aaKnown RBP8.21□□□□□ -1.1
PFDN1-204ENST00000512707 PMS2P11Q13670 270 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 DEFB114Q30KQ6 69 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 CST9LP1Q5W188 147 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 CMTM2Q8TAZ6 248 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 SUN5Q8TC36 379 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 ZNF503Q96F45 646 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 C16orf92Q96LL3 132 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 SPAG8Q99932 426 aaPredicted RBP8.21□□□□□ -1.1
PFDN1-204ENST00000512707 EIF5A2Q9GZV4 153 aaKnown RBP8.21□□□□□ -1.1
PFDN1-204ENST00000512707 TMPRSS5Q9H3S3 457 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.1
PFDN1-204ENST00000512707 TRAV2A0A0B4J234 112 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 H3BQ15 152 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 ISLRO14498 428 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 TSPAN4O14817 238 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
PFDN1-204ENST00000512707 PAGE4O60829 102 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 BCL2P10415 239 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 EDN2P20800 178 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 CSN1S1P47710 185 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 RANP62826 216 aaKnown RBP8.2□□□□□ -1.1
PFDN1-204ENST00000512707 CCL20P78556 96 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 GUCA2BQ16661 112 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 HAGHQ16775 308 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 CD300EQ496F6 205 aaPredicted RBP8.2□□□□□ -1.1
PFDN1-204ENST00000512707 PRR31Q5SQ13 230 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 ADAMTSL5Q6ZMM2 481 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 WFDC9Q8NEX5 89 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 FAM210AQ96ND0 272 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 TCEAL7Q9BRU2 100 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 MS4A6AQ9H2W1 248 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 OTORQ9NRC9 128 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 VAX2Q9UIW0 290 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 PRELID1Q9Y255 219 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 SMAD5-AS1Q9Y6J3 95 aa8.2□□□□□ -1.1
PFDN1-204ENST00000512707 MEGF8Q7Z7M0 2845 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 F6UZH7 168 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 H3BTX0 84 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 IGLV1-51P01701 117 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 SNRPCP09234 159 aaKnown RBP8.19□□□□□ -1.1
PFDN1-204ENST00000512707 TFPI2P48307 235 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 MEF2BQ02080 365 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-204ENST00000512707 PEA15Q15121 130 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 NDUFA5Q16718 116 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 TOR2AQ5JU69 321 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 FAM90A2PQ658T7 463 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 TMEM61Q8N0U2 210 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 GBGT1Q8N5D6 347 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 RXFP4Q8TDU9 374 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 Q9H3A6 140 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 ZNF331Q9NQX6 463 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-204ENST00000512707 MED9Q9NWA0 146 aa8.19□□□□□ -1.1
PFDN1-204ENST00000512707 ZMAT5Q9UDW3 170 aaKnown RBP8.19□□□□□ -1.1
PFDN1-204ENST00000512707 RAB19A4D1S5 217 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 K7EQM0 130 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 PDE6DO43924 150 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 GHRHP01286 108 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 SLC25A5P05141 298 aaKnown RBP8.18□□□□□ -1.1
PFDN1-204ENST00000512707 CMC4P56277 68 aaPredicted RBP8.18□□□□□ -1.1
PFDN1-204ENST00000512707 WFDC3Q8IUB2 231 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 C5orf17Q8NAS9 161 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 SMDT1Q9H4I9 107 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 YTHDF2Q9Y5A9 579 aaKnown RBP8.18□□□□□ -1.1
PFDN1-204ENST00000512707 SELENOKQ9Y6D0 94 aa8.18□□□□□ -1.1
PFDN1-204ENST00000512707 LOC102723971A0A1B0GUV8 181 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms