RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 LIME1Q9H400 295 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 ANAPC10Q9UM13 185 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 VSIG4Q9Y279 399 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 FBN2P35556 2912 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 LINC00473A8K010 186 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 H3BQ15 152 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 ETV2O00321 342 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 FFAR1O14842 300 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 YPEL1O60688 119 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 SS18L1O75177 396 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 VMA21Q3ZAQ7 101 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 DNM1P46Q6ZS02 220 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 LRP11Q86VZ4 500 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 LHFPL1Q86WI0 220 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 ITLN2Q8WWU7 325 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 YPEL2Q96QA6 119 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 SCRT1Q9BWW7 348 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 EIF5A2Q9GZV4 153 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 OTORQ9NRC9 128 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 PYGO1Q9Y3Y4 419 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 RNF114Q9Y508 228 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 IER3IP1Q9Y5U9 82 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 MAST4O15021 2626 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 APCP25054 2843 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGKV1D-42A0A075B6H8 117 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRAV4A0A0B4J268 109 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGLC7A0M8Q6 106 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ARRDC5A6NEK1 342 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR4C45A6NMZ5 311 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 C19orf84I3L1E1 186 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 CDK2AP2O75956 126 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 IFITM1P13164 125 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF93P35789 620 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 HINT1P49773 126 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 SRSF9Q13242 221 aaKnown RBP eCLIP3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 RTL8BQ17RB0 113 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ABCA11PQ4W5N1 156 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 UBE2NLQ5JXB2 153 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 Q6ZRU5 148 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TMEM75Q8N9X5 138 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR4K13Q8NH42 304 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 PPP1R1CQ8WVI7 109 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 DDB2Q92466 427 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TVP23CQ96ET8 276 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 RTL8AQ9BWD3 113 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 WDR61Q9GZS3 305 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TMEM106BQ9NUM4 274 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TMEM242Q9NWH2 141 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 CALYQ9NYX4 217 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 CLCF1Q9UBD9 225 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 SIGLEC7Q9Y286 467 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRAV27A0A087WT01 109 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRBV6-7A0A0A0MS04 114 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ODAMA1E959 279 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 CDC42EP2O14613 210 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 MPDZO75970 2070 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGLC2P0DOY2 106 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 HLA-DOBP13765 273 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 HERVK_113P63121 156 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 C12orf73Q69YU5 71 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 NR2C2APQ86WQ0 139 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF101Q8IZC7 436 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 INTS1Q8N201 2190 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF491Q8N8L2 437 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 RITA1Q96K30 269 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 MRPL20Q9BYC9 149 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 C7orf69Q9H7B7 122 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 PKDREJQ9NTG1 2253 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 V9GY05 133 aa3.92□□□□□ -1.78
TRAPPC11-208ENST00000511955 SPG11Q96JI7 2443 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 MED12LQ86YW9 2145 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRGV10A0A0A0MS01 117 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGHV2-26A0A0B4J1V2 119 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 MEIS3P1A6NDR6 274 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 DIRC3C9JPN6 131 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 TAX1BP3O14907 124 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 TNFSF12O43508 249 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 HYPMO75409 117 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 SPATA45Q537H7 98 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF709Q8N972 641 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 NUP35Q8NFH5 326 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 C11orf68Q9H3H3 251 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 AKAP6Q13023 2319 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 CACNA1CQ13936 2221 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 DOCK7Q96N67 2140 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 DYSFO75923 2080 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 VPS13CQ709C8 3753 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 NAV2Q8IVL1 2488 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 ALPK2Q86TB3 2170 aa3.91□□□□□ -1.78
TRAPPC11-208ENST00000511955 LY6LH3BQJ8 138 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 MRPL33O75394 65 aaKnown RBP3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 APOMO95445 188 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 OPRM1P35372 400 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms