RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CITED4Q96RK1 184 aa12.75□□□□□ -0.37
SCAMP1-203ENST00000510030 SLC35B3Q9H1N7 401 aa12.75□□□□□ -0.37
SCAMP1-203ENST00000510030 C2orf70A6NJV1 201 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 OVOL1O14753 267 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 CHEK1O14757 476 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 EIF3GO75821 320 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 PF4P02776 101 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 CBLN1P23435 193 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 UBE2G2P60604 165 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 ICAM4Q14773 271 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 NSUN5P1Q3KNT7 163 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 BLNKQ8WV28 456 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
SCAMP1-203ENST00000510030 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 SLC7A5P1Q8MH63 180 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 ZNF586Q9NXT0 402 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 PRELID1Q9Y255 219 aa12.73□□□□□ -0.37
SCAMP1-203ENST00000510030 SERTM2A0A1B0GWG4 89 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 FOLR2P14207 255 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 S100A1P23297 94 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 CSN1S1P47710 185 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 RANP62826 216 aaKnown RBP12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 PAFAH1B2P68402 229 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 DLX4Q92988 240 aaPredicted RBP12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 ZNF747Q9BV97 191 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 YTHDF2Q9Y5A9 579 aaKnown RBP12.72□□□□□ -0.37
SCAMP1-203ENST00000510030 IGHV3-49A0A0A0MS15 119 aa12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 H3BQ15 152 aa12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 K7EQM0 130 aa12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 APOHP02749 345 aaPredicted RBP12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 RARRES2Q99969 163 aa12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 Q9H3A6 140 aa12.71□□□□□ -0.37
SCAMP1-203ENST00000510030 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 TRAV2A0A0B4J234 112 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 IGHV3-66A0A0C4DH42 116 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 TMEM218A2RU14 115 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 FBLL1A6NHQ2 334 aaKnown RBP12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 S100A9P06702 114 aaKnown RBP12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 SFTA3P0C7M3 94 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 ID1P41134 155 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 CD81P60033 236 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 KRTAP10-3P60369 221 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 SOHLH1Q5JUK2 328 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 SHISA2Q6UWI4 295 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 TCF24Q7RTU0 167 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 C3orf56Q8N813 242 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 MRPL53Q96EL3 112 aaKnown RBP12.7□□□□□ -0.38
SCAMP1-203ENST00000510030 TRAV25A0A0B4J276 109 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 ISLRO14498 428 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 SLC25A5P05141 298 aaKnown RBP12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 SRP19P09132 144 aaKnown RBP12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 ATP5G3P48201 142 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 DUX3Q96PT4 197 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 SEC11CQ9BY50 192 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 ZNF331Q9NQX6 463 aaPredicted RBP12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 MLXQ9UH92 298 aa12.69□□□□□ -0.38
SCAMP1-203ENST00000510030 NBEAL1Q6ZS30 2694 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 PGPA6NDG6 321 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 NDUFB4O95168 129 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 RBPMS2Q6ZRY4 209 aaKnown RBP12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 C16orf92Q96LL3 132 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 ATG101Q9BSB4 218 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 SMAD5-AS1Q9Y6J3 95 aa12.68□□□□□ -0.38
SCAMP1-203ENST00000510030 F8W036 122 aa12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 CSN3P07498 182 aa12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 INSL3P51460 131 aa12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 CNN1P51911 297 aaKnown RBP12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 SRSF3P84103 164 aaKnown RBP12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 CYB561D1Q8N8Q1 229 aa12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 MCRIP2Q9BUT9 160 aaKnown RBP12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
SCAMP1-203ENST00000510030 DNASE2O00115 360 aaPredicted RBP12.66□□□□□ -0.38
SCAMP1-203ENST00000510030 PEX7O00628 323 aa12.66□□□□□ -0.38
SCAMP1-203ENST00000510030 SNRPD3P62318 126 aaKnown RBP12.66□□□□□ -0.38
SCAMP1-203ENST00000510030 FAM90A2PQ658T7 463 aa12.66□□□□□ -0.38
SCAMP1-203ENST00000510030 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
SCAMP1-203ENST00000510030 SLC17A3O00476 420 aa12.65□□□□□ -0.38
SCAMP1-203ENST00000510030 TSPAN4O14817 238 aa12.65□□□□□ -0.38
SCAMP1-203ENST00000510030 TCRAP04437 139 aa12.65□□□□□ -0.38
SCAMP1-203ENST00000510030 AKR1C3P42330 323 aa12.65□□□□□ -0.38
SCAMP1-203ENST00000510030 CEBPGP53567 150 aa12.65□□□□□ -0.38
SCAMP1-203ENST00000510030 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms