RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RHOBP62745 196 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 RAB2BQ8WUD1 216 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 CIB3Q96Q77 187 aaPredicted RBP11□□□□□ -0.65
RAB40C-202ENST00000509637 BCL7BQ9BQE9 202 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 STRAPQ9Y3F4 350 aaKnown RBP11□□□□□ -0.65
RAB40C-202ENST00000509637 A0A0J9YY99 117 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 SLC17A3O00476 420 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 HYPMO75409 117 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 LINC00869P0C866 280 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 TMBIM6P55061 237 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 CCL18P55774 89 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 RRAS2P62070 204 aaPredicted RBP10.99□□□□□ -0.65
RAB40C-202ENST00000509637 RPUSD4Q96CM3 377 aaKnown RBP10.99□□□□□ -0.65
RAB40C-202ENST00000509637 SCRT2Q9NQ03 307 aa10.99□□□□□ -0.65
RAB40C-202ENST00000509637 TIMM8BQ9Y5J9 83 aaPredicted RBP10.99□□□□□ -0.65
RAB40C-202ENST00000509637 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 LINC00854A0A1B0GVQ3 168 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 SMCO3A2RU48 225 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 ZNF701M0R085 212 aaPredicted RBP10.98□□□□□ -0.65
RAB40C-202ENST00000509637 OR5G3P0C626 314 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
RAB40C-202ENST00000509637 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 ZNF331Q9NQX6 463 aaPredicted RBP10.98□□□□□ -0.65
RAB40C-202ENST00000509637 PSENENQ9NZ42 101 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 FLVCR2Q9UPI3 526 aa10.98□□□□□ -0.65
RAB40C-202ENST00000509637 C9orf170A2RU37 121 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 DLK1P80370 383 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 SLC38A11Q08AI6 406 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 OR5I1Q13606 314 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 GFI1BQ5VTD9 330 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 TMEM14EPQ6UXP3 125 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 Q6ZRN7 208 aaPredicted RBP10.97□□□□□ -0.65
RAB40C-202ENST00000509637 TMEM256Q8N2U0 113 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 TOMM5Q8N4H5 51 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 MCFD2Q8NI22 146 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 RXFP4Q8TDU9 374 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 ARL6Q9H0F7 186 aa10.97□□□□□ -0.65
RAB40C-202ENST00000509637 GAGE12BA1L429 117 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 CCDC160A6NGH7 325 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 H3BQ15 152 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 GAGE7O76087 117 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 METTL15P1P0C7V9 234 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 GAGE12FP0CL80 117 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 GAGE12GP0CL81 117 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 GAGE12IP0CL82 117 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 CDKN1BP46527 198 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 RAP2BP61225 183 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 RPP30P78346 268 aaKnown RBP10.96□□□□□ -0.65
RAB40C-202ENST00000509637 PYDC2Q56P42 97 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 TMEM263Q8WUH6 116 aaKnown RBP10.96□□□□□ -0.65
RAB40C-202ENST00000509637 TMEM37Q8WXS4 190 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 VSIG2Q96IQ7 327 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 SMIM8Q96KF7 97 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 SLC25A21Q9BQT8 299 aaPredicted RBP10.96□□□□□ -0.65
RAB40C-202ENST00000509637 ARV1Q9H2C2 271 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 Q9H3A6 140 aa10.96□□□□□ -0.65
RAB40C-202ENST00000509637 K7EPK0 472 aa10.95□□□□□ -0.66
RAB40C-202ENST00000509637 CLINT1Q14677 625 aa10.95□□□□□ -0.66
RAB40C-202ENST00000509637 ZNF493Q6ZR52 646 aa10.95□□□□□ -0.66
RAB40C-202ENST00000509637 GNPNAT1Q96EK6 184 aaPredicted RBP10.95□□□□□ -0.66
RAB40C-202ENST00000509637 SAT2Q96F10 170 aaPredicted RBP10.95□□□□□ -0.66
RAB40C-202ENST00000509637 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
RAB40C-202ENST00000509637 ZNF586Q9NXT0 402 aa10.95□□□□□ -0.66
RAB40C-202ENST00000509637 HERC1Q15751 4861 aa10.95□□□□□ -0.66
RAB40C-202ENST00000509637 SSSCA1O60232 199 aa10.94□□□□□ -0.66
RAB40C-202ENST00000509637 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
RAB40C-202ENST00000509637 CCDC190Q86UF4 302 aa10.94□□□□□ -0.66
RAB40C-202ENST00000509637 RCL1Q9Y2P8 373 aaKnown RBP10.94□□□□□ -0.66
RAB40C-202ENST00000509637 TNFRSF18Q9Y5U5 241 aa10.94□□□□□ -0.66
RAB40C-202ENST00000509637 FAT1Q14517 4588 aa10.94□□□□□ -0.66
RAB40C-202ENST00000509637 TRAV5A0A0B4J249 113 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 H7BYZ3 331 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 J3KRW8 73 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 M6PRP20645 277 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 FAUP35544 74 aaKnown RBP10.93□□□□□ -0.66
RAB40C-202ENST00000509637 OPCMLQ14982 345 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 Q6ZTI0 123 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 ZNF431Q8TF32 576 aaPredicted RBP10.93□□□□□ -0.66
RAB40C-202ENST00000509637 MGST2Q99735 147 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 TMPRSS5Q9H3S3 457 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 NPVFQ9HCQ7 196 aa10.93□□□□□ -0.66
RAB40C-202ENST00000509637 MRPS16Q9Y3D3 137 aaKnown RBP10.93□□□□□ -0.66
RAB40C-202ENST00000509637 A0A096LPF7 62 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 IGLC2P0DOY2 106 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 ANXA7P20073 488 aaKnown RBP10.92□□□□□ -0.66
RAB40C-202ENST00000509637 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
RAB40C-202ENST00000509637 UBE2MP61081 183 aaKnown RBP10.92□□□□□ -0.66
RAB40C-202ENST00000509637 SELENOTP62341 195 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 BAK1Q16611 211 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 Q6ZQT7 251 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 LINC00305Q7Z4B0 112 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 ZNF503Q96F45 646 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 PPP1R14DQ9NXH3 145 aa10.92□□□□□ -0.66
RAB40C-202ENST00000509637 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
RAB40C-202ENST00000509637 AGPAT2O15120 278 aa10.91□□□□□ -0.66
RAB40C-202ENST00000509637 BTCP35070 178 aa10.91□□□□□ -0.66
RAB40C-202ENST00000509637 XGP55808 180 aa10.91□□□□□ -0.66
RAB40C-202ENST00000509637 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
RAB40C-202ENST00000509637 LRRC20Q8TCA0 184 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms