RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LRRC29Q8WV35 223 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 ARPC1AQ92747 370 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 DLX4Q92988 240 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 RAB37Q96AX2 223 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 SPAG8Q99932 426 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 PRTFDC1Q9NRG1 225 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 TECRQ9NZ01 308 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 POLDIP2Q9Y2S7 368 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 LINC00312Q9Y6C7 94 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 SETD2Q9BYW2 2564 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 NBASA2RRP1 2371 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 MUC22E2RYF6 1773 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A1W2PPI3 338 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 SH2D7A6NKC9 451 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 PMS2P5A8MQ11 134 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 C21orf140B9A014 251 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 J3KT08 172 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 K7EN84 100 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 CHEK1O14757 476 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 SLC31A1O15431 190 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 CT62P0C5K7 136 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 PVRP15151 417 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 BCL3P20749 454 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 GATA2P23769 480 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 MPV17P39210 176 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 KIR2DS2P43631 304 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 UQCRFS1P47985 274 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 NDUFV3P56181 108 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 FBXW4P57775 412 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 PLGLB1Q02325 96 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 GUSBP1Q15486 140 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 TMEM30BQ3MIR4 351 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 TMEM78Q5T7P6 136 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 MORN3Q6PF18 240 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 RBPMS2Q6ZRY4 209 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 MOB3BQ86TA1 216 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 TEN1Q86WV5 123 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 MKXQ8IYA7 352 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 FADS6Q8N9I5 356 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 NUP35Q8NFH5 326 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 CT55Q8WUE5 264 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 COQ2Q96H96 371 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 SPACA5Q96QH8 159 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 NRTNQ99748 197 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 NGBQ9NPG2 151 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 CCL28Q9NRJ3 127 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 IDI2-AS1Q9NZ38 188 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 PILRAQ9UKJ1 303 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 SIGLEC9Q9Y336 463 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 CSMD1Q96PZ7 3565 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 HEATR5BQ9P2D3 2071 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 FLNCQ14315 2725 aa3.62□□□□□ -1.83
PDLIM5-211ENST00000508531 USP9YO00507 2555 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 NAV3Q8IVL0 2385 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ITPR2Q14571 2701 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 NUMA1Q14980 2115 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A087WX48 190 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV3D-20A0A0C4DH25 116 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A0G2JNG1 304 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF816-ZNF321PA0A0X1KG74 233 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A1B0GXF2 115 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 C5orf49A4QMS7 147 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 OOEPA6NGQ2 149 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 GGTLC3B5MD39 225 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 M0R135 149 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 KLK10O43240 276 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 MOSP00540 346 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 P04436 131 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF688P0C7X2 276 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 FGF6P10767 208 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 VDAC2P45880 294 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 KRTAP10-3P60369 221 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 FGF12P61328 243 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 PCBD1P61457 104 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 KIR2DS5Q14953 304 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF146Q15072 292 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 PSG5Q15238 335 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 TBC1D28Q2M2D7 210 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 KIAA1644Q3SXP7 199 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ETDBQ3ZM63 59 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 FAM120AOSQ5T036 256 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 C10orf128Q5T292 105 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 SLC35E4Q6ICL7 350 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF841Q6ZN19 808 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 SSX8Q7RTT4 187 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 NAT6Q93015 286 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ST6GALNAC6Q969X2 333 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 RPEQ96AT9 228 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF799Q96GE5 643 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 LITAFQ99732 161 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 HDHD3Q9BSH5 251 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 FAM60AQ9NP50 221 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 RAB9BQ9NP90 201 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF492Q9P255 531 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 VPREB3Q9UKI3 123 aa3.61□□□□□ -1.83
PDLIM5-211ENST00000508531 KLF12Q9Y4X4 402 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms