RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 COQ8AQ8NI60 647 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 DEDD2Q8WXF8 326 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 SLC35E1Q96K37 410 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 CSTL1Q9H114 145 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 C20orf85Q9H1P6 137 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 NUDT15Q9NV35 164 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 PSENENQ9NZ42 101 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 CACFD1Q9UGQ2 172 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 TBC1D24Q9ULP9 559 aa3.31□□□□□ -1.88
NUP54-206ENST00000508465 STRAPQ9Y3F4 350 aaKnown RBP3.31□□□□□ -1.88
NUP54-206ENST00000508465 A0A0J9YWU9 116 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 SMCO3A2RU48 225 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 C5orf51A6NDU8 294 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 SNRPGP15A8MWD9 76 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 FAM90A26D6RGX4 464 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 SIX6O95475 246 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 PRB4P10163 310 aaPredicted RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 ORM2P19652 201 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 BMI1P35226 326 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 NKX2-1P43699 371 aaPredicted RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 APOC4P55056 127 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 ATP5IP56385 69 aaPredicted RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 LYZP61626 148 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 FCN2Q15485 313 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 PSMG4Q5JS54 123 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 ACTL10Q5JWF8 245 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 OR4D5Q8NGN0 318 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 ZNF431Q8TF32 576 aaPredicted RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 MITD1Q8WV92 249 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 PPP1R14BQ96C90 147 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 GRAMD2BQ96HH9 432 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 NARS2Q96I59 477 aaKnown RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 SMIM8Q96KF7 97 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 LINC00052Q96N35 136 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 CIB3Q96Q77 187 aaPredicted RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 RAB40CQ96S21 281 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 C7orf50Q9BRJ6 194 aaKnown RBP3.3□□□□□ -1.88
NUP54-206ENST00000508465 TMEM231Q9H6L2 316 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 SCRT2Q9NQ03 307 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 CLEC5AQ9NY25 188 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 STARD9Q9P2P6 4700 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
NUP54-206ENST00000508465 AGRNO00468 2067 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 C7orf66A4D0T2 115 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 HELTA6NFD8 242 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 PRSS46E5RG02 174 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 SCGB2A1O75556 95 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 CST7O76096 145 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 CA1P00915 261 aaPredicted RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 CD5P06127 495 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 SNRPCP09234 159 aaKnown RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 GIG44P09565 113 aaPredicted RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 CFC1P0CG37 223 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 EIF2B2P49770 351 aaKnown RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 BCAP31P51572 246 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 FXYD7P58549 80 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 AKR1C1Q04828 323 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 ZNF846Q147U1 533 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 ACOT7LQ6ZUV0 252 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 STHQ8IWL8 128 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 OR8I2Q8N0Y5 310 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 C12orf45Q8N5I9 185 aaPredicted RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 THAP8Q8NA92 274 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 OR1B1Q8NGR6 318 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 OR11H2Q8NH07 326 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 DCANP1Q8TF63 244 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 S100ZQ8WXG8 99 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 TRGV9Q99603 122 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 RSG1Q9BU20 258 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 CCDC32Q9BV29 185 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 GFRA4Q9GZZ7 299 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 SLC25A22Q9H936 323 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 DOK5Q9P104 306 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 RCL1Q9Y2P8 373 aaKnown RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 PAM16Q9Y3D7 125 aa3.29□□□□□ -1.88
NUP54-206ENST00000508465 LSM5Q9Y4Y9 91 aaKnown RBP3.29□□□□□ -1.88
NUP54-206ENST00000508465 KIR2DL5BA0A0G2JN68 375 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 KIR2DL5BA0A0G2JPC4 375 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 FAM24AA6NFZ4 105 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 C5orf52A6NGY3 159 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 ZNF98A6NK75 572 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 PMS2P5A8MQ11 134 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 F6UB75 175 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 K7EPK0 472 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 L7N2F9 121 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 UPK1BO75841 260 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 IL5P05113 134 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 FABP1P07148 127 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 ZNF705DP0CH99 300 aaPredicted RBP3.28□□□□□ -1.88
NUP54-206ENST00000508465 ZNF705BP0CI00 300 aaPredicted RBP3.28□□□□□ -1.88
NUP54-206ENST00000508465 AP2S1P53680 142 aaPredicted RBP3.28□□□□□ -1.88
NUP54-206ENST00000508465 S100A10P60903 97 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 FGL1Q08830 312 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
NUP54-206ENST00000508465 ASAH1Q13510 395 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms