RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 TRAV10A0A0B4J240 114 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 CCDC160A6NGH7 325 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 TSTD3H0UI37 97 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 M0R233 179 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 M0R2N4 97 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 INE1O15225 51 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 RER1O15258 196 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 FAM107AO95990 144 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 RPL7P18124 248 aaKnown RBP0.62□□□□□ -2.31
SMN2-208ENST00000508258 RPS3P23396 243 aaKnown RBP eCLIP0.62□□□□□ -2.31
SMN2-208ENST00000508258 S100GP29377 79 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 S100A11P31949 105 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 ZNF93P35789 620 aaPredicted RBP0.62□□□□□ -2.31
SMN2-208ENST00000508258 CDK6Q00534 326 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 HRCT1Q6UXD1 115 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 TMEM14EPQ6UXP3 125 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 CROCCP2Q86T23 111 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 CLECL1Q8IZS7 167 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 OR9Q1Q8NGQ5 310 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 OR4K15Q8NH41 348 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 GRPEL2Q8TAA5 225 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 DIRC1Q969H9 104 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 MUCL1Q96DR8 90 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 HYLS1Q96M11 299 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 CCDC115Q96NT0 180 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 TP53RKQ96S44 253 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 KLK9Q9UKQ9 250 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 GINS2Q9Y248 185 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 EML6Q6ZMW3 1958 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 LAMB4A4D0S4 1761 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 KIAA1107Q9UPP5 1409 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 HEATR5BQ9P2D3 2071 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 COL24A1Q17RW2 1714 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 SCN8AQ9UQD0 1980 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 SORL1Q92673 2214 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 PLXNA4Q9HCM2 1894 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 TRAV27A0A087WT01 109 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 IGKV2-40A0A087WW87 121 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 IGHV1-58A0A0C4DH39 117 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 TRBV7-6A0A0J9YX20 115 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 IGKV2-29A2NJV5 120 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 KPNA4O00629 521 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 CCL16O15467 120 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 ERC2-IT1O76042 136 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 IGKV2D-40P01614 121 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 TEX261Q6UWH6 196 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 C2orf82Q6UX34 121 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 ARPINQ7Z6K5 226 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 OR5AS1Q8N127 324 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 FAM216BQ8N7L0 139 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 CCL4L1Q8NHW4 92 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 Q8TAT8 98 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 C10orf105Q8TEF2 133 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 SKA2Q8WVK7 121 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 PSMF1Q92530 271 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 ANP32BQ92688 251 aaKnown RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 RAB37Q96AX2 223 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 LINC00052Q96N35 136 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 MCEEQ96PE7 176 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 GGACTQ9BVM4 153 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 KRTAP4-1Q9BYQ7 146 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 TCEAL2Q9H3H9 227 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 C19orf12Q9NSK7 152 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 HSPB11Q9Y547 144 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 SNURFQ9Y675 71 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 U3KQ87 197 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 MYLKQ15746 1914 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 PCDH15Q96QU1 1955 aa0.61□□□□□ -2.31
SMN2-208ENST00000508258 NUP210Q8TEM1 1887 aaPredicted RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 MYO5AQ9Y4I1 1855 aaKnown RBP0.61□□□□□ -2.31
SMN2-208ENST00000508258 BAZ2BQ9UIF8 2168 aaKnown RBP0.6□□□□□ -2.31
SMN2-208ENST00000508258 CEP192Q8TEP8 1941 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 TRBV6-4A0A1B0GX49 114 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 hDV103S1A0JD37 113 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 OR2T8A6NH00 312 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 GEMIN2O14893 280 aaKnown RBP0.6□□□□□ -2.31
SMN2-208ENST00000508258 LYNX1P0DP58 116 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 CXCL8P10145 99 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 FABP2P12104 132 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 SDC2P34741 201 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 RPS28P62857 69 aaKnown RBP0.6□□□□□ -2.31
SMN2-208ENST00000508258 MPV17LQ2QL34 196 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 Q6ZSA8 131 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 LRRC18Q8N456 261 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 PYDC1Q8WXC3 89 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 CDC42SE1Q9NRR8 79 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 TAS2R7Q9NYW3 318 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 TRAPPC2LQ9UL33 140 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 FAM135BQ49AJ0 1406 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 CECR2Q9BXF3 1484 aa0.6□□□□□ -2.31
SMN2-208ENST00000508258 DLC1Q96QB1 1528 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 MGAMO43451 1857 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 RTTNQ86VV8 2226 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 TRBV27A0A0K0K1C4 114 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 LOC107984640A0A0U1RRK4 108 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 A0A1B0GX51 115 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 C9orf170A2RU37 121 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 C5orf67F2Z3F1 127 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 J3KT08 172 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 LYRM1O43325 122 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms