RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 TMEM238C9JI98 176 aa0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 VBP1P61758 197 aa0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 TMEM14EPQ6UXP3 125 aa0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 PRRT1Q99946 306 aa0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 HOPXQ9BPY8 73 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 E9PCH4 1651 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 E5RI56 91 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 GPR31O00270 319 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 CROCCP2Q86T23 111 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 STX19Q8N4C7 294 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 OR10AG1Q8NH19 301 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 PSMF1Q92530 271 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 PLEKHB2Q96CS7 222 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 ZC2HC1AQ96GY0 325 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 BIN3Q9NQY0 253 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 GID8Q9NWU2 228 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 ASB4Q9Y574 426 aa0.84□□□□□ -2.27
HMGB1P28-201ENST00000507778 SCN3AQ9NY46 2000 aa0.84□□□□□ -2.28
HMGB1P28-201ENST00000507778 PEAK1Q9H792 1746 aa0.84□□□□□ -2.28
HMGB1P28-201ENST00000507778 MYH7BA7E2Y1 1941 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 A0A1W2PPM0 123 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 LYRM1O43325 122 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 HBBP68871 147 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 EIF3IQ13347 325 aaKnown RBP0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 RTL8BQ17RB0 113 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 FKBP1CQ5VVH2 108 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 OR2H1Q9GZK4 316 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 NISCHQ9Y2I1 1504 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 MCM3APO60318 1980 aa0.83□□□□□ -2.28
HMGB1P28-201ENST00000507778 PIAS1O75925 651 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 CST7O76096 145 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 PPYP01298 95 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 IDO1P14902 403 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 SERPINB1P30740 379 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 GLRXP35754 106 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 RPL35P42766 123 aaKnown RBP0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 LTC4SQ16873 150 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 PPP1R2P3Q6NXS1 205 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 C3orf33Q6P1S2 294 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 PHF5AQ7RTV0 110 aaKnown RBP0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 FAM216BQ8N7L0 139 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 NEK7Q8TDX7 302 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 WFDC10AQ9H1F0 79 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 BOLA2Q9H3K6 86 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 LAMTOR3Q9UHA4 124 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 TRPM1Q7Z4N2 1603 aa0.82□□□□□ -2.28
HMGB1P28-201ENST00000507778 YTHDC2Q9H6S0 1430 aaKnown RBP0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 C9orf170A2RU37 121 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 C5orf67F2Z3F1 127 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 JMJD7-PLA2G4BH0Y9G9 81 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 CIRBPQ14011 172 aaKnown RBP0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 TRIQKQ629K1 86 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 LINC00575Q6W349 94 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 SBSPONQ8IVN8 264 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 FAM24BQ8N5W8 94 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 RNF11Q9Y3C5 154 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 OBSL1O75147 1896 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 ROCK1Q13464 1354 aa0.81□□□□□ -2.28
HMGB1P28-201ENST00000507778 H3BQV1 296 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 IGLV3-1P01715 115 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 G0S2P27469 103 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 GNG10P50151 68 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 CRYBA4P53673 196 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 DYDC1Q8WWB3 177 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 TCEAL2Q9H3H9 227 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 MED11Q9P086 117 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 HSPB8Q9UJY1 196 aa0.8□□□□□ -2.28
HMGB1P28-201ENST00000507778 FRMPD1Q5SYB0 1578 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 A0A096LPI6 279 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 PPP5D1E7EU14 171 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 SPATA45Q537H7 98 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 PRR15Q8IV56 129 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 BORCS8Q96FH0 119 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 IL20Q9NYY1 176 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 RTL9Q8NET4 1388 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 MYH10P35580 1976 aa0.79□□□□□ -2.28
HMGB1P28-201ENST00000507778 SCN8AQ9UQD0 1980 aa0.78□□□□□ -2.28
HMGB1P28-201ENST00000507778 MT-ND6P03923 174 aa0.78□□□□□ -2.28
HMGB1P28-201ENST00000507778 CARD19Q96LW7 228 aa0.78□□□□□ -2.28
HMGB1P28-201ENST00000507778 OTORQ9NRC9 128 aa0.78□□□□□ -2.28
HMGB1P28-201ENST00000507778 SYNMO15061 1565 aa0.78□□□□□ -2.29
HMGB1P28-201ENST00000507778 TRAV23DV6A0A075B6W5 121 aa0.77□□□□□ -2.29
HMGB1P28-201ENST00000507778 KPNA4O00629 521 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P28-201ENST00000507778 VMA21Q3ZAQ7 101 aa0.77□□□□□ -2.29
HMGB1P28-201ENST00000507778 DCUN1D2Q6PH85 259 aa0.77□□□□□ -2.29
HMGB1P28-201ENST00000507778 MCEEQ96PE7 176 aa0.77□□□□□ -2.29
HMGB1P28-201ENST00000507778 NUBP2Q9Y5Y2 271 aa0.77□□□□□ -2.29
HMGB1P28-201ENST00000507778 NUP98P52948 1817 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 TECPR2O15040 1411 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 ERBINQ96RT1 1412 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 TRDV1A0A1B0GX56 115 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 MAP1LC3B2A6NCE7 125 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 FOXI2Q6ZQN5 318 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 OR10AC1Q8NH08 325 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 ISOC1Q96CN7 298 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 CST11Q9H112 138 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 NAT8BQ9UHF3 227 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 TPRKBQ9Y3C4 175 aa0.76□□□□□ -2.29
HMGB1P28-201ENST00000507778 EML5Q05BV3 1969 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms