RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ATG5Q9H1Y0 275 aa2.58□□□□□ -2
HMGB3P15-201ENST00000507326 COMMD3Q9UBI1 195 aa2.58□□□□□ -2
HMGB3P15-201ENST00000507326 EPDR1Q9UM22 224 aa2.58□□□□□ -2
HMGB3P15-201ENST00000507326 KLK5Q9Y337 293 aaPredicted RBP2.58□□□□□ -2
HMGB3P15-201ENST00000507326 TRAPPC1Q9Y5R8 145 aa2.58□□□□□ -2
HMGB3P15-201ENST00000507326 ABCA3Q99758 1704 aa2.58□□□□□ -2
HMGB3P15-201ENST00000507326 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.58□□□□□ -2
HMGB3P15-201ENST00000507326 LAMB4A4D0S4 1761 aa2.58□□□□□ -2
HMGB3P15-201ENST00000507326 PAPPAQ13219 1627 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 TJP1Q07157 1748 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 PKD1L3Q7Z443 1732 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 RGPD5Q99666 1765 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 TRBV20-1A0A075B6N2 111 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 IGKV6D-21A0A0A0MT36 114 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 IGHV5-51A0A0C4DH38 117 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 LOC100130705A0A1B0GUX0 176 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 A0A1W2PRS3 328 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF727A8MUV8 499 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 SRRM5B3KS81 715 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 LY6LH3BQJ8 138 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 BPY2O14599 106 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 SYNGR2O43760 224 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 CREBL2O60519 120 aaPredicted RBP2.57□□□□□ -2
HMGB3P15-201ENST00000507326 HYPMO75409 117 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 IGKV1-5P01602 117 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 APCSP02743 223 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 IL7P13232 177 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 SLC25A16P16260 332 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF80P51504 273 aaPredicted RBP2.57□□□□□ -2
HMGB3P15-201ENST00000507326 PEA15Q15121 130 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 LPAL2Q16609 132 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 LINC01554Q52M75 96 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 PYY3Q5JQD4 70 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 C12orf73Q69YU5 71 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 OR2T2Q6IF00 324 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 NOXRED1Q6NXP6 359 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 CEMP1Q6PRD7 247 aaPredicted RBP2.57□□□□□ -2
HMGB3P15-201ENST00000507326 TMEM91Q6ZNR0 172 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 MARCH3Q86UD3 253 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 C3orf22Q8N5N4 141 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF525Q8N782 197 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 MORN4Q8NDC4 146 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 DPH3Q96FX2 82 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 SDF2Q99470 211 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 LINC00467Q9BRT7 94 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 TMEM106BQ9NUM4 274 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 TCHHQ07283 1943 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 NFAT5O94916 1531 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 ABCC6O95255 1503 aa2.57□□□□□ -2
HMGB3P15-201ENST00000507326 STRCP1A6NGW2 1772 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 COL18A1P39060 1754 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 SCN11AQ9UI33 1791 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 NLRC5Q86WI3 1866 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 TDRD6O60522 2096 aaKnown RBP2.56□□□□□ -2
HMGB3P15-201ENST00000507326 IGLV3-10A0A075B6K4 115 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 IGHV3-43A0A0B4J1X8 118 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 IGHV3-72A0A0B4J1Y9 119 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 LOC107986453A0A1B0GWG9 222 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 SNCGO76070 127 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 MPC2O95563 127 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 HBDP02042 147 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 CXCL1P09341 107 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 PATE4P0C8F1 98 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 TRGC1P0CF51 173 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF286BP0CG31 522 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF823P16415 610 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF136P52737 540 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 LYZP61626 148 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 GNB2P62879 340 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 KIAA0040Q15053 153 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 UBE2SQ16763 222 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 LINC00526Q96FQ7 95 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF799Q96GE5 643 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 HYLS1Q96M11 299 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 C18orf15Q96N68 181 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 SMDT1Q9H4I9 107 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF581Q9P0T4 197 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 RNF11Q9Y3C5 154 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 SERP1Q9Y6X1 66 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 EDC4Q6P2E9 1401 aaKnown RBP2.56□□□□□ -2
HMGB3P15-201ENST00000507326 SLIT3O75094 1523 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 NHSL1Q5SYE7 1610 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 KIF1AQ12756 1690 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 NUP188Q5SRE5 1749 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 LAMA4Q16363 1823 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ATAD5Q96QE3 1844 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 SCN1AP35498 2009 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 ARID1AO14497 2285 aa2.56□□□□□ -2
HMGB3P15-201ENST00000507326 A0A1B0GUL6 1792 aa2.55□□□□□ -2
HMGB3P15-201ENST00000507326 PXDNLA1KZ92 1463 aa2.55□□□□□ -2
HMGB3P15-201ENST00000507326 ZNF736B4DX44 427 aaPredicted RBP2.55□□□□□ -2
HMGB3P15-201ENST00000507326 KRTAP4-16G5E9R7 235 aaPredicted RBP2.55□□□□□ -2
HMGB3P15-201ENST00000507326 H3BT86 120 aa2.55□□□□□ -2
HMGB3P15-201ENST00000507326 SDCBPO00560 298 aaPredicted RBP2.55□□□□□ -2
HMGB3P15-201ENST00000507326 SOCS3O14543 225 aa2.55□□□□□ -2
HMGB3P15-201ENST00000507326 LEPROTO15243 131 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms