RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 KAAG1Q9UBP8 84 aa14.02□□□□□ -0.17
NUP54-205ENST00000507257 ARFGEF3Q5TH69 2177 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 VSTM5A8MXK1 200 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 CDX4O14627 284 aaPredicted RBP14.01□□□□□ -0.17
NUP54-205ENST00000507257 IGHV1-8P0DP01 117 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 SCGB1A1P11684 91 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 MRPL51Q4U2R6 128 aaKnown RBP14.01□□□□□ -0.17
NUP54-205ENST00000507257 PLA2G2CQ5R387 149 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 LYZL1Q6UWQ5 148 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 S100A7AQ86SG5 101 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 TMEM133Q9H2Q1 129 aa14.01□□□□□ -0.17
NUP54-205ENST00000507257 NKX2-8O15522 239 aa14□□□□□ -0.17
NUP54-205ENST00000507257 ENSAO43768 121 aaKnown RBP14□□□□□ -0.17
NUP54-205ENST00000507257 HLA-DRB4P13762 266 aa14□□□□□ -0.17
NUP54-205ENST00000507257 LOXP28300 417 aaPredicted RBP14□□□□□ -0.17
NUP54-205ENST00000507257 CCL8P80075 99 aa14□□□□□ -0.17
NUP54-205ENST00000507257 PPP1R27Q86WC6 154 aa14□□□□□ -0.17
NUP54-205ENST00000507257 ZMAT4Q9H898 229 aa14□□□□□ -0.17
NUP54-205ENST00000507257 HILPDAQ9Y5L2 63 aa14□□□□□ -0.17
NUP54-205ENST00000507257 HLA-DRB4X5D2U9 266 aa14□□□□□ -0.17
NUP54-205ENST00000507257 PLXNB1O43157 2135 aa14□□□□□ -0.17
NUP54-205ENST00000507257 IGHV3-21A0A0B4J1V1 117 aa14□□□□□ -0.17
NUP54-205ENST00000507257 NDUFS7O75251 213 aa14□□□□□ -0.17
NUP54-205ENST00000507257 SMIM13P0DJ93 91 aa14□□□□□ -0.17
NUP54-205ENST00000507257 WT1P19544 449 aaPredicted RBP14□□□□□ -0.17
NUP54-205ENST00000507257 AMN1Q8IY45 258 aa14□□□□□ -0.17
NUP54-205ENST00000507257 FAM215AQ9Y5M1 114 aa14□□□□□ -0.17
NUP54-205ENST00000507257 PLCE1Q9P212 2302 aa13.99□□□□□ -0.17
NUP54-205ENST00000507257 LOC389332A0A1B0GUA5 103 aa13.99□□□□□ -0.17
NUP54-205ENST00000507257 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
NUP54-205ENST00000507257 PLGLAQ15195 96 aa13.99□□□□□ -0.17
NUP54-205ENST00000507257 RNF5Q99942 180 aa13.99□□□□□ -0.17
NUP54-205ENST00000507257 C1orf185Q5T7R7 199 aa13.98□□□□□ -0.17
NUP54-205ENST00000507257 SAMD5Q5TGI4 173 aa13.98□□□□□ -0.17
NUP54-205ENST00000507257 PCP2Q8IVA1 136 aa13.98□□□□□ -0.17
NUP54-205ENST00000507257 TMEM213A2RRL7 107 aa13.98□□□□□ -0.17
NUP54-205ENST00000507257 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
NUP54-205ENST00000507257 C17orf77Q96MU5 243 aa13.98□□□□□ -0.17
NUP54-205ENST00000507257 SH2D1AO60880 128 aa13.97□□□□□ -0.17
NUP54-205ENST00000507257 RBP4P02753 201 aa13.97□□□□□ -0.17
NUP54-205ENST00000507257 S100A7P31151 101 aa13.97□□□□□ -0.17
NUP54-205ENST00000507257 TMEM108Q6UXF1 575 aa13.97□□□□□ -0.17
NUP54-205ENST00000507257 IGHV3-72A0A0B4J1Y9 119 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 WI2-2373I1.2A0A1W2PRP0 233 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 K7EIM0 57 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 IGLV1-47P01700 117 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 NMUP48645 174 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 SRSF1Q07955 248 aaKnown RBP eCLIP13.96□□□□□ -0.177e-7■□□□□ 8.2
NUP54-205ENST00000507257 ADIPOQQ15848 244 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 LYPD2Q6UXB3 125 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 C8orf49Q96NF6 230 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 TPPP3Q9BW30 176 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 AAMDCQ9H7C9 122 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 CTSZQ9UBR2 303 aa13.96□□□□□ -0.17
NUP54-205ENST00000507257 DMDP11532 3685 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 CNTFRP26992 372 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 CKS2P33552 79 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 RAB37Q96AX2 223 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 RNF125Q96EQ8 232 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 CNFNQ9BYD5 112 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 SMPXQ9UHP9 88 aa13.96□□□□□ -0.18
NUP54-205ENST00000507257 IGHV1-3A0A0C4DH29 117 aa13.95□□□□□ -0.18
NUP54-205ENST00000507257 NPYP01303 97 aa13.95□□□□□ -0.18
NUP54-205ENST00000507257 IGLC6P0CF74 106 aa13.95□□□□□ -0.18
NUP54-205ENST00000507257 TM2D2Q9BX73 214 aa13.95□□□□□ -0.18
NUP54-205ENST00000507257 EVI2AP22794 236 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 C22orf34Q6ZV56 151 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 PHLDA1Q8WV24 401 aaPredicted RBP13.94□□□□□ -0.18
NUP54-205ENST00000507257 NAA38Q9BRA0 125 aaKnown RBP13.94□□□□□ -0.18
NUP54-205ENST00000507257 RAB1BQ9H0U4 201 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 HHLA3Q9XRX5 114 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 ICE1Q9Y2F5 2266 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 APELAP0DMC3 54 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 FCER1GP30273 86 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 ODF1Q14990 250 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 ZNF48Q96MX3 618 aaPredicted RBP13.94□□□□□ -0.18
NUP54-205ENST00000507257 VGLL1Q99990 258 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 MAP1LC3AQ9H492 121 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 DKK2Q9UBU2 259 aa13.94□□□□□ -0.18
NUP54-205ENST00000507257 M0R3E3 92 aa13.93□□□□□ -0.18
NUP54-205ENST00000507257 BMI1P35226 326 aa13.93□□□□□ -0.18
NUP54-205ENST00000507257 FAM27E3Q08E93 113 aa13.93□□□□□ -0.18
NUP54-205ENST00000507257 SAMD13Q5VXD3 122 aa13.93□□□□□ -0.18
NUP54-205ENST00000507257 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
NUP54-205ENST00000507257 NXT2Q9NPJ8 142 aaKnown RBP13.93□□□□□ -0.18
NUP54-205ENST00000507257 NDUFS8O00217 210 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 BUB1B-PAK6H3BSN5 160 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 FXYD2P54710 66 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 TAL2Q16559 108 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 PRR25Q96S07 402 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 CHAC1Q9BUX1 264 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 MALRD1Q5VYJ5 2156 aa13.92□□□□□ -0.18
NUP54-205ENST00000507257 ATP5LO75964 103 aa13.91□□□□□ -0.18
NUP54-205ENST00000507257 IL4P05112 153 aa13.91□□□□□ -0.18
NUP54-205ENST00000507257 PRSS57Q6UWY2 283 aa13.91□□□□□ -0.18
NUP54-205ENST00000507257 FOXI2Q6ZQN5 318 aa13.91□□□□□ -0.18
NUP54-205ENST00000507257 FBXL15Q9H469 300 aa13.91□□□□□ -0.18
NUP54-205ENST00000507257 F8W1H4 67 aa13.9□□□□□ -0.18
NUP54-205ENST00000507257 PPIAL4GP0DN37 164 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms