RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 MBP02144 154 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 ZNF688P0C7X2 276 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 TAS2R45P59539 299 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 PSG9Q00887 426 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 NHLH2Q02577 135 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 PDE6HQ13956 83 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 NDUFA5Q16718 116 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 PSMG4Q5JS54 123 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 ZNF680Q8NEM1 530 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 RNF183Q96D59 192 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 MGST2Q99735 147 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 RSG1Q9BU20 258 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 NPCDR1Q9BY65 106 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 WDR61Q9GZS3 305 aaKnown RBP7.3□□□□□ -1.24
NR1I3-220ENST00000505005 PRELID1Q9Y255 219 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 ARL16Q0P5N6 197 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 APRG1Q8IVJ8 170 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-220ENST00000505005 HRH4Q9H3N8 390 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 TMEM14CQ9P0S9 112 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 TIMM9Q9Y5J7 89 aa7.29□□□□□ -1.24
NR1I3-220ENST00000505005 SMIM9A6NGZ8 99 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 HLA-DRB4P13762 266 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 GATA2P23769 480 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-220ENST00000505005 RHOBP62745 196 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 SERF2P84101 59 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 ACOT6Q3I5F7 207 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-220ENST00000505005 TRPT1Q86TN4 253 aaKnown RBP7.28□□□□□ -1.24
NR1I3-220ENST00000505005 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-220ENST00000505005 RARRES2Q99969 163 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 SLC25A32Q9H2D1 315 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 SAV1Q9H4B6 383 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-220ENST00000505005 AAMDCQ9H7C9 122 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 CYTL1Q9NRR1 136 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 PPP1R14DQ9NXH3 145 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 DOK5Q9P104 306 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 TGP01266 2768 aa7.28□□□□□ -1.24
NR1I3-220ENST00000505005 TEX48A0A1B0GUV7 120 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 A0A1W2PPV4 95 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 TMEM189A5PLL7 270 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 H3BMM0 161 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 CA1P00915 261 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-220ENST00000505005 SEC11BP0C7V7 166 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 HIST1H1EP10412 219 aaKnown RBP7.27□□□□□ -1.25
NR1I3-220ENST00000505005 MIFP14174 115 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 RPL35AP18077 110 aaKnown RBP7.27□□□□□ -1.25
NR1I3-220ENST00000505005 RAB5CP51148 216 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 CLINT1Q14677 625 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 ACTL10Q5JWF8 245 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 FAM74A1Q5RGS3 127 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 MIC13Q5XKP0 118 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 LYPD1Q8N2G4 141 aa7.27□□□□□ -1.25
NR1I3-220ENST00000505005 MRPL53Q96EL3 112 aaKnown RBP7.27□□□□□ -1.25
NR1I3-220ENST00000505005 SOCS3O14543 225 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 TSPOP30536 169 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 RAB14P61106 215 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 PSG3Q16557 428 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 CLLU1Q5K131 121 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 FAM78BQ5VT40 261 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 LEMD1Q68G75 181 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 TMEM182Q6ZP80 229 aaPredicted RBP7.26□□□□□ -1.25
NR1I3-220ENST00000505005 ARL6IP6Q8N6S5 226 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 OR10J6PQ8NGY7 276 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 MUC7Q8TAX7 377 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 TMEM37Q8WXS4 190 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 OVOL2Q9BRP0 275 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 PSMG3Q9BT73 122 aaPredicted RBP7.26□□□□□ -1.25
NR1I3-220ENST00000505005 SCRT1Q9BWW7 348 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 WFDC10AQ9H1F0 79 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 SELENOKQ9Y6D0 94 aa7.26□□□□□ -1.25
NR1I3-220ENST00000505005 A0A0J9YX75 114 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 UMAD1C9J7I0 102 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 M6PRP20645 277 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 CSN1S1P47710 185 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 KHDC3LQ587J8 217 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 RPL7L1Q6DKI1 246 aaKnown RBP7.25□□□□□ -1.25
NR1I3-220ENST00000505005 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 PATE2Q6UY27 113 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 PQLC2Q6ZP29 291 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 ZNF738Q8NE65 137 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 SAT2Q96F10 170 aaPredicted RBP7.25□□□□□ -1.25
NR1I3-220ENST00000505005 UHRF2Q96PU4 802 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 NEU1Q99519 415 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 C20orf144Q9BQM9 153 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 ZNF331Q9NQX6 463 aaPredicted RBP7.25□□□□□ -1.25
NR1I3-220ENST00000505005 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 FUT9Q9Y231 359 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 GOLT1BQ9Y3E0 138 aa7.25□□□□□ -1.25
NR1I3-220ENST00000505005 PRKDCP78527 4128 aaKnown RBP7.24□□□□□ -1.25
NR1I3-220ENST00000505005 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 FFAR4Q5NUL3 377 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 DPPA3Q6W0C5 159 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 TMEM256Q8N2U0 113 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 OR4B1Q8NGF8 309 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 OR2G3Q8NGZ4 309 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 OR11H2Q8NH07 326 aa7.24□□□□□ -1.25
NR1I3-220ENST00000505005 RXFP4Q8TDU9 374 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms