RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PSG5Q15238 335 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 TMEM30BQ3MIR4 351 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 TDRG1Q3Y452 100 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 SPINK9Q5DT21 86 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 GCSAMLQ5JQS6 135 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 FAM231DQ6ZW35 169 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 MUC15Q8N387 334 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.24□□□□□ -1.89
RFC1-208ENST00000504849 ZNRF1Q8ND25 227 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 ST6GALNAC3Q8NDV1 305 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 OR2M7Q8NG81 312 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 OR8B3Q8NGG8 313 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 TSKUQ8WUA8 353 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 NEUROG1Q92886 237 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
RFC1-208ENST00000504849 C9orf85Q96MD7 179 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 OR8B2Q96RD0 313 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 TMEM70Q9BUB7 260 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 RAB1BQ9H0U4 201 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 MS4A6AQ9H2W1 248 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 HES4Q9HCC6 221 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 PRNDQ9UKY0 176 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 PSG11Q9UQ72 335 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 MPDZO75970 2070 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 ATG2AQ2TAZ0 1938 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 CACNA1CQ13936 2221 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 A0A0G2JMM0 328 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 A0A1W2PPB8 328 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 A0A1W2PRS3 328 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 KIR3DP1A8MWS1 328 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 IQCF6A8MYZ5 107 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 H0YJW9 148 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 CCL25O15444 150 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 TSPAN13O95857 204 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 CGAP01215 116 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 HLA-DRB1P01911 266 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 C8orf88P0DMB2 117 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 CRYBB3P26998 211 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 LEPP41159 167 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 CA7P43166 264 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 REG1BP48304 166 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 TCL1AP56279 114 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 HSPE1P61604 102 aaKnown RBP3.23□□□□□ -1.89
RFC1-208ENST00000504849 ARF6P62330 175 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 UBE2L3P68036 154 aaKnown RBP3.23□□□□□ -1.89
RFC1-208ENST00000504849 RHOGP84095 191 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 KRTAP21-3Q3LHN1 58 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 MRPL54Q6P161 138 aaKnown RBP3.23□□□□□ -1.89
RFC1-208ENST00000504849 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 UNQ5815/PRO19632Q6UWF5 114 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 ACP7Q6ZNF0 438 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 C9orf139Q6ZV77 190 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 ZNF329Q86UD4 541 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 MDP1Q86V88 176 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 NIT1Q86X76 327 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 Q8N7P7 452 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 RFESDQ8TAC1 157 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 UBALD1Q8TB05 177 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 C18orf32Q8TCD1 76 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 AP1S3Q96PC3 154 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 NABP2Q9BQ15 211 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 MCRIP2Q9BUT9 160 aaKnown RBP3.23□□□□□ -1.89
RFC1-208ENST00000504849 MAP1LC3CQ9BXW4 147 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 HSPB8Q9UJY1 196 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 ZNF257Q9Y2Q1 563 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 FER1L5A0AVI2 2057 aa3.23□□□□□ -1.89
RFC1-208ENST00000504849 SPTBP11277 2137 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 GOLGA4Q13439 2230 aaKnown RBP3.22□□□□□ -1.89
RFC1-208ENST00000504849 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 A6NDN8 102 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 OR4C46A6NHA9 309 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 F2Z2F3 143 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 PEX7O00628 323 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 CD5LO43866 347 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 COX7A2P2O60397 106 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 SPINK4O60575 86 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 FCN3O75636 299 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 KLF7O75840 302 aaPredicted RBP3.22□□□□□ -1.89
RFC1-208ENST00000504849 DEFA4P12838 97 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 SSTR5P35346 364 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 SEC11AP67812 179 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 HBBP68871 147 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 HIST1H1AQ02539 215 aaPredicted RBP3.22□□□□□ -1.89
RFC1-208ENST00000504849 AESQ08117 197 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 FXYD3Q14802 87 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 TNXAQ16473 311 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 PSG3Q16557 428 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 Q56UQ5 140 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 OCIAD2Q56VL3 154 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 PSMG4Q5JS54 123 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 SPATA31B1PQ5VZV4 182 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 MIR17HGQ75NE6 70 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 WDR86Q86TI4 376 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 DOLPP1Q86YN1 238 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 OR1L8Q8NGR8 309 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 SLC25A40Q8TBP6 338 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 IGF2BP2-AS1Q96M15 143 aa3.22□□□□□ -1.89
RFC1-208ENST00000504849 ZNF714Q96N38 554 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms