RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 PITX3O75364 302 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 HYPMO75409 117 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 GAGE7O76087 117 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 RLN2P04090 185 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 GAGE12FP0CL80 117 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 GAGE12GP0CL81 117 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 GAGE12IP0CL82 117 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 CDKN1BP46527 198 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 ZNF493Q6ZR52 646 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 CYP2G1PQ6ZSU1 146 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 RNASE8Q8TDE3 154 aaKnown RBP6.18□□□□□ -1.42
NR1I3-218ENST00000503547 RXFP4Q8TDU9 374 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 ZNF586Q9NXT0 402 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 RABL2AQ9UBK7 228 aaPredicted RBP6.18□□□□□ -1.42
NR1I3-218ENST00000503547 RABL2BQ9UNT1 228 aa6.18□□□□□ -1.42
NR1I3-218ENST00000503547 STRAPQ9Y3F4 350 aaKnown RBP6.18□□□□□ -1.42
NR1I3-218ENST00000503547 SNURFLB1AK76 121 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 H7BYZ3 331 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 ZNF701M0R085 212 aaPredicted RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 LINC00869P0C866 280 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 CXCL3P19876 107 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 ANXA7P20073 488 aaKnown RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 FAUP35544 74 aaKnown RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 PSG3Q16557 428 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 S100A7AQ86SG5 101 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 CCDC190Q86UF4 302 aa6.17□□□□□ -1.42
NR1I3-218ENST00000503547 RPUSD4Q96CM3 377 aaKnown RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 RSL24D1Q9UHA3 163 aaKnown RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 FLG2Q5D862 2391 aaPredicted RBP6.17□□□□□ -1.42
NR1I3-218ENST00000503547 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 PRSS46E5RG02 174 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 J3KRW8 73 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 EREGO14944 169 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 HOXB5P09067 269 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 SNRPCP09234 159 aaKnown RBP6.16□□□□□ -1.42
NR1I3-218ENST00000503547 SLC25A6P12236 298 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 BTF3P20290 206 aaKnown RBP6.16□□□□□ -1.42
NR1I3-218ENST00000503547 LINC00315P59091 139 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 SPCS2Q15005 226 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 ESRGQ1W209 222 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 TMEM128Q5BJH2 165 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 ZNF503Q96F45 646 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 UPK3BQ9BT76 320 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 PARD6GQ9BYG4 376 aaPredicted RBP6.16□□□□□ -1.42
NR1I3-218ENST00000503547 ARL6Q9H0F7 186 aa6.16□□□□□ -1.42
NR1I3-218ENST00000503547 MRPS16Q9Y3D3 137 aaKnown RBP6.16□□□□□ -1.42
NR1I3-218ENST00000503547 A0A087X0K7 114 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 PMS2P5A8MQ11 134 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 SMIM18P0DKX4 95 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 INAFM2P0DMQ5 153 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 HOXA5P20719 270 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 RRAS2P62070 204 aaPredicted RBP6.15□□□□□ -1.42
NR1I3-218ENST00000503547 SELENOTP62341 195 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 C20orf144Q9BQM9 153 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 TMPRSS5Q9H3S3 457 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 RNF24Q9Y225 148 aa6.15□□□□□ -1.42
NR1I3-218ENST00000503547 TRGV2A0A075B6R0 118 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 FABP12A6NFH5 140 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 H3BNG1 76 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 SSSCA1O60232 199 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 SFT2D2O95562 160 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 FUSP35637 526 aaKnown RBP eCLIP6.14□□□□□ -1.43
NR1I3-218ENST00000503547 AP3S2P59780 193 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 ERVFC1-1P60608 527 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 GFI1BQ5VTD9 330 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 LCN15Q6UWW0 184 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 LRTM2Q8N967 370 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 MCFD2Q8NI22 146 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 SLC50A1Q9BRV3 221 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 ARV1Q9H2C2 271 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 PSENENQ9NZ42 101 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 CCDC59Q9P031 241 aaKnown RBP6.14□□□□□ -1.43
NR1I3-218ENST00000503547 MGAT4CQ9UBM8 478 aa6.14□□□□□ -1.43
NR1I3-218ENST00000503547 TRAV12-3A0A0B4J271 114 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 H3BTX0 84 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 GOSR2O14653 212 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 SIVA1O15304 175 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 CXCL2P19875 107 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 POLR2GP62487 172 aaKnown RBP eCLIP6.13□□□□□ -1.43
NR1I3-218ENST00000503547 SLC38A11Q08AI6 406 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 PPP1R1AQ13522 171 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 Q5VSD8 79 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 Q6ZTI0 123 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 TOMM5Q8N4H5 51 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 LINC00612Q8N6U2 182 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 FRZBQ92765 325 aa6.13□□□□□ -1.43
NR1I3-218ENST00000503547 ZNF331Q9NQX6 463 aaPredicted RBP6.13□□□□□ -1.43
NR1I3-218ENST00000503547 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
NR1I3-218ENST00000503547 TRGV1A0A0A0MS02 117 aa6.12□□□□□ -1.43
NR1I3-218ENST00000503547 PRAC2D3DTV9 90 aa6.12□□□□□ -1.43
NR1I3-218ENST00000503547 COX7A2P2O60397 106 aa6.12□□□□□ -1.43
NR1I3-218ENST00000503547 NOL3O60936 208 aaKnown RBP6.12□□□□□ -1.43
NR1I3-218ENST00000503547 SCGB1D2O95969 90 aa6.12□□□□□ -1.43
NR1I3-218ENST00000503547 IFNA5P01569 189 aa6.12□□□□□ -1.43
NR1I3-218ENST00000503547 METTL15P1P0C7V9 234 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms