RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 FAM201AQ5SY85 155 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 FAM120AOSQ5T036 256 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 LCN10Q6JVE6 187 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 RPTNQ6XPR3 784 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 C6orf201Q7Z4U5 140 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 HMGN2P46Q86SG4 172 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 WFDC3Q8IUB2 231 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 OR5AS1Q8N127 324 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 BCL6BQ8N143 479 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-203ENST00000502998 C3orf56Q8N813 242 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 FAM57AQ8TBR7 257 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 DNAJA3Q96EY1 480 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 SHANK2-AS3Q9BTD1 123 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 ZNF331Q9NQX6 463 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-203ENST00000502998 SCN2AQ99250 2005 aa5.21□□□□□ -1.57
CLCN3-203ENST00000502998 TDRD6O60522 2096 aaKnown RBP5.21□□□□□ -1.58
CLCN3-203ENST00000502998 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 TRAV8-2A0A0B4J237 113 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 PIGBOS1A0A0B4J2F0 54 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 CTXND1A0A1B0GTU2 59 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 ATOX1O00244 68 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 LYZL6O75951 148 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 NDUFB2O95178 105 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 C1orf105O95561 183 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 P01737 135 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 IGKCP01834 107 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 COX6A1P12074 109 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 CLDN17P56750 224 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 FBXW4P57775 412 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 RPL30P62888 115 aaKnown RBP5.21□□□□□ -1.58
CLCN3-203ENST00000502998 TMEM52BQ4KMG9 183 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 GUSBP11Q6P575 273 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 Q6ZQT7 251 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 SPACA3Q8IXA5 215 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 MMD2Q8IY49 270 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 CLECL1Q8IZS7 167 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 TMEM252Q8N6L7 170 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 POM121L12Q8N7R1 296 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 UBE2E3Q969T4 207 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 NABP1Q96AH0 204 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 C16orf92Q96LL3 132 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 C1QTNF5Q9BXJ0 243 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 PDFQ9HBH1 243 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 ZNF256Q9Y2P7 627 aaPredicted RBP5.21□□□□□ -1.58
CLCN3-203ENST00000502998 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 MTORP42345 2549 aa5.21□□□□□ -1.58
CLCN3-203ENST00000502998 NUP214P35658 2090 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-203ENST00000502998 KIAA1549Q9HCM3 1950 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 TRPM6Q9BX84 2022 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 A0A1W2PNU3 283 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-203ENST00000502998 CRYM-AS1A6NIL9 109 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 C9JCJ5 164 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 M0R1B8 84 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 SLC25A14O95258 325 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-203ENST00000502998 ASAH2BP0C7U1 165 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 HOXD3P31249 432 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-203ENST00000502998 CXCL5P42830 114 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 DYNLT3P51808 116 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 RTL8BQ17RB0 113 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 C12orf74Q32Q52 190 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 LGALS9BQ3B8N2 356 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 LGALS9CQ6DKI2 356 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 IGFL2Q6UWQ7 119 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 ZNF493Q6ZR52 646 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 Q6ZRU5 148 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 OR5C1Q8NGR4 320 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 BORCS8Q96FH0 119 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 FAM19A4Q96LR4 140 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 C18orf15Q96N68 181 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 MGST2Q99735 147 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 GLIPR2Q9H4G4 154 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 OCIAD1Q9NX40 245 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 Q9UF83 564 aa5.2□□□□□ -1.58
CLCN3-203ENST00000502998 KLK5Q9Y337 293 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-203ENST00000502998 SETD2Q9BYW2 2564 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-203ENST00000502998 LRRK1Q38SD2 2015 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 TCRBV4S1A1TA0A5B7 111 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 K7EM74 188 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 GYPBP06028 91 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 ELANEP08246 267 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 LIFP15018 202 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 COL8A2P25067 703 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 SSR2P43308 183 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 FXYD2P54710 66 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 CDSNQ15517 529 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 ZNF726P1Q15940 193 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 DGAT2L6Q6ZPD8 337 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 RAB42Q8N4Z0 105 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 LINC00311Q8N616 119 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 DRAM1Q8N682 238 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 Q8NA96 180 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 TMEM158Q8WZ71 300 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 TSACCQ96A04 125 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-203ENST00000502998 C2orf48Q96LS8 159 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 ODF3Q96PU9 254 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 FOXC2Q99958 501 aa5.19□□□□□ -1.58
CLCN3-203ENST00000502998 NHP2Q9NX24 153 aaKnown RBP5.19□□□□□ -1.58
CLCN3-203ENST00000502998 RNF7Q9UBF6 113 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms