RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TAS2R30P59541 319 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 DNAJB13P59910 316 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 RPL18Q07020 188 aaKnown RBP3.84□□□□□ -1.79
BRCA1-224ENST00000497488 FUT5Q11128 374 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 LDLRAD2Q5SZI1 272 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF322Q6U7Q0 402 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-224ENST00000497488 SDIM1Q6ZPB5 146 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 LHFPL1Q86WI0 220 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 PRR15Q8IV56 129 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 CNEP1R1Q8N9A8 125 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 ST20-AS1Q8NBB2 130 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 OR4C16Q8NGL9 310 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 CCL4L1Q8NHW4 92 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 DCANP1Q8TF63 244 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 TTTY13Q9BZ97 58 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 TMEM133Q9H2Q1 129 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 CACYBPQ9HB71 228 aaKnown RBP3.84□□□□□ -1.79
BRCA1-224ENST00000497488 MCTS1Q9ULC4 181 aaKnown RBP3.84□□□□□ -1.79
BRCA1-224ENST00000497488 BPTFQ12830 3046 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 FREM2Q5SZK8 3169 aa3.84□□□□□ -1.8
BRCA1-224ENST00000497488 IGKV1D-37A0A075B6S9 117 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 C19orf71A6NCJ1 209 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 TLCD2A6NGC4 264 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 GGT3PA6NGU5 568 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 C1orf196B1AJZ1 125 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 C9JAW5 83 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 M0R378 163 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 TNFSF15O95150 251 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 C1QAP02745 245 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 IGLV7-43P04211 117 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
BRCA1-224ENST00000497488 PSMB8P28062 276 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 CMPK1P30085 196 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 FXYD7P58549 80 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 MEF2BQ02080 365 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-224ENST00000497488 DEFB133Q30KQ1 61 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 Q6ZQT7 251 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 RPP25LQ8N5L8 163 aaKnown RBP3.83□□□□□ -1.8
BRCA1-224ENST00000497488 BPIFB6Q8NFQ5 453 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 OR52R1Q8NGF1 315 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 OR4C6Q8NH72 309 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 BORCS8Q96FH0 119 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 SLC25A21Q9BQT8 299 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-224ENST00000497488 C2orf88Q9BSF0 95 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 MND1Q9BWT6 205 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 C16orf95Q9H693 158 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 HIGD1AQ9Y241 93 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 COL5A1P20908 1838 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-224ENST00000497488 ANKRD36A6QL64 1941 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 PI4KAP42356 2102 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 ASCC3Q8N3C0 2202 aaKnown RBP3.83□□□□□ -1.8
BRCA1-224ENST00000497488 CACNA1AO00555 2505 aa3.83□□□□□ -1.8
BRCA1-224ENST00000497488 SPTBN4Q9H254 2564 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 SHROOM3Q8TF72 1996 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 COL27A1Q8IZC6 1860 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-224ENST00000497488 GRIFINA4D1Z8 144 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 FABP5P3A8MUU1 101 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 H3BQ85 93 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 APOC4-APOC2K7ER74 178 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 APOC2P02655 101 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 SCTP09683 121 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 HLA-DMBP28068 263 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 HIST1H4AP62805 103 aaKnown RBP3.82□□□□□ -1.8
BRCA1-224ENST00000497488 SLC38A11Q08AI6 406 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 PLCXD2Q0VAA5 305 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 LINC01554Q52M75 96 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 SPANXN3Q5MJ09 141 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 C1orf140Q5VVS0 124 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 ZFP2Q6ZN57 461 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 OR8I2Q8N0Y5 310 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 CLDND2Q8NHS1 167 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 STAG3L4Q8TBR4 150 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 NAT14Q8WUY8 206 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 C1orf54Q8WWF1 131 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 PATE1Q8WXA2 126 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 ZNF285Q96NJ3 590 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 YIPF3Q9GZM5 350 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 OR8D2Q9GZM6 311 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 SMDT1Q9H4I9 107 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 RPS10P5Q9NQ39 176 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 OTORQ9NRC9 128 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 SLC39A9Q9NUM3 307 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 U3KQ87 197 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 ZFHX4Q86UP3 3567 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 CACNA1EQ15878 2313 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 ARHGAP21Q5T5U3 1957 aa3.82□□□□□ -1.8
BRCA1-224ENST00000497488 NCOR2Q9Y618 2525 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 A0A096LPI6 279 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 LOC285095A0A1B0GVY8 99 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 A0A1W2PNU3 283 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-224ENST00000497488 ARRDC5A6NEK1 342 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 CCDC160A6NGH7 325 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 GABARAPH6UMI1 98 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 TNFP01375 233 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 IL4P05112 153 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 SPINT3P49223 89 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 RPL26P61254 145 aaKnown RBP3.81□□□□□ -1.8
BRCA1-224ENST00000497488 AKR1C1Q04828 323 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 EIF3IQ13347 325 aaKnown RBP3.81□□□□□ -1.8
BRCA1-224ENST00000497488 DNLZQ5SXM8 178 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms