RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 DAND5Q8N907 189 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 OR4B1Q8NGF8 309 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 NAT14Q8WUY8 206 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 LCN9Q8WX39 176 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 DPH3Q96FX2 82 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 ZNF714Q96N38 554 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 DPY30Q9C005 99 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 BANF2Q9H503 90 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 FUT9Q9Y231 359 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 KLK5Q9Y337 293 aaPredicted RBP1.95□□□□□ -2.1
VPS36-206ENST00000497149 NOP16Q9Y3C1 178 aaKnown RBP1.95□□□□□ -2.1
VPS36-206ENST00000497149 HLA-DRB4X5D2U9 266 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 TANC2Q9HCD6 1990 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 ERICH3Q5RHP9 1530 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 GRIN2AQ12879 1464 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 ABCC10Q5T3U5 1492 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 NEO1Q92859 1461 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 HECW2Q9P2P5 1572 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 THSD7AQ9UPZ6 1657 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 LCTP09848 1927 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 IGKV1-12A0A0C4DH73 117 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 TCRBV3S1A0A5B6 114 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 C7orf71A4D174 169 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 LY6LH3BQJ8 138 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 APOC4-APOC2K7ER74 178 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 SLC25A20O43772 301 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 YPEL1O60688 119 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 KLF7O75840 302 aaPredicted RBP1.94□□□□□ -2.1
VPS36-206ENST00000497149 IGKV1D-12P01611 117 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 APOC2P02655 101 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 RPL27AP46776 148 aaKnown RBP1.94□□□□□ -2.1
VPS36-206ENST00000497149 TMEM258P61165 79 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 UBA52P62987 128 aaKnown RBP1.94□□□□□ -2.1
VPS36-206ENST00000497149 ZNF90Q03938 601 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 BSPH1Q075Z2 132 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 TMEM155Q4W5P6 130 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 LINC01554Q52M75 96 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 Q56UQ5 140 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 TEN1Q86WV5 123 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 PLPP5Q8NEB5 264 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 OR10P1Q8NGE3 313 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 STAG3L4Q8TBR4 150 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 RAB37Q96AX2 223 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 PRELID3AQ96N28 172 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 NPCDR1Q9BY65 106 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 OSTCQ9NRP0 149 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 MED9Q9NWA0 146 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 FKBP11Q9NYL4 201 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 AP4S1Q9Y587 144 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 UBR2Q8IWV8 1755 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 ADAMTSL1Q8N6G6 1762 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 POLEQ07864 2286 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 FER1L6Q2WGJ9 1857 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 TRPM3Q9HCF6 1732 aaPredicted RBP1.94□□□□□ -2.1
VPS36-206ENST00000497149 CAMSAP2Q08AD1 1489 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 RAPGEF2Q9Y4G8 1499 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
VPS36-206ENST00000497149 MYH13Q9UKX3 1938 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 KDM6AO15550 1401 aaPredicted RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 ARHGAP31Q2M1Z3 1444 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 COL18A1P39060 1754 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 TRAV12-2A0A075B6T6 113 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 A0A0D9SEW6 157 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 ODAMA1E959 279 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 GRIFINA4D1Z8 144 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 C17orf51A8MQB3 221 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 TMEM262E9PQX1 116 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 H3BQF6 201 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 PGLYRP1O75594 196 aaPredicted RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 TCL1BO95988 128 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 TCRAP04437 139 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 CD2P06729 351 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 NPPCP23582 126 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 CRYBB3P26998 211 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 DYNLT3P51808 116 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 TSPEAR-AS2P59090 65 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 MRPS36P82909 103 aaKnown RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 CATR1Q13166 79 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 ZNF846Q147U1 533 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 MRPL54Q6P161 138 aaKnown RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 ZNF705AQ6ZN79 300 aaPredicted RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 TMEM91Q6ZNR0 172 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 BPIFA4PQ86YQ2 179 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 C10orf111Q8N326 155 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 OR4X2Q8NGF9 303 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 DCANP1Q8TF63 244 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 AQP10Q96PS8 301 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 SEC11CQ9BY50 192 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 KTN1Q86UP2 1357 aaKnown RBP1.93□□□□□ -2.1
VPS36-206ENST00000497149 BCL9LQ86UU0 1499 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 MYH7BA7E2Y1 1941 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 TRPM6Q9BX84 2022 aa1.93□□□□□ -2.1
VPS36-206ENST00000497149 DSPPQ9NZW4 1301 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 RRBP1Q9P2E9 1410 aaKnown RBP1.92□□□□□ -2.1
VPS36-206ENST00000497149 MAPKBP1O60336 1514 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 DSCAMO60469 2012 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 IGKV1D-43A0A0B4J1Z2 117 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 FAM236AA0A1B0GUQ0 79 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms