RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 A0A087X0K7 114 aa16.37■□□□□ 0.21
ECHDC3-205ENST00000496136 WIPF1O43516 503 aa16.37■□□□□ 0.21
ECHDC3-205ENST00000496136 CCL20P78556 96 aa16.37■□□□□ 0.21
ECHDC3-205ENST00000496136 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.37■□□□□ 0.21
ECHDC3-205ENST00000496136 OR2K2Q8NGT1 345 aa16.37■□□□□ 0.21
ECHDC3-205ENST00000496136 SUN5Q8TC36 379 aa16.37■□□□□ 0.21
ECHDC3-205ENST00000496136 TRBV19A0A075B6N1 114 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 OXLD1Q5BKU9 147 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 IQCF2Q8IXL9 164 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 LYPD6BQ8NI32 183 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 DCANP1Q8TF63 244 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 BLNKQ8WV28 456 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 NMBP08949 121 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 PAFAH1B2P68402 229 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 GUK1Q16774 197 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 WFDC3Q8IUB2 231 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 TMEM167BQ9NRX6 74 aa16.36■□□□□ 0.21
ECHDC3-205ENST00000496136 TEX46H3BTG2 121 aa16.35■□□□□ 0.21
ECHDC3-205ENST00000496136 DNASE2O00115 360 aaPredicted RBP16.35■□□□□ 0.21
ECHDC3-205ENST00000496136 HBE1P02100 147 aa16.35■□□□□ 0.21
ECHDC3-205ENST00000496136 TFPI2P48307 235 aa16.35■□□□□ 0.21
ECHDC3-205ENST00000496136 MEOX2P50222 304 aa16.35■□□□□ 0.21
ECHDC3-205ENST00000496136 NDUFB4O95168 129 aa16.34■□□□□ 0.21
ECHDC3-205ENST00000496136 LCN12Q6JVE5 192 aa16.34■□□□□ 0.21
ECHDC3-205ENST00000496136 SPAG8Q99932 426 aaPredicted RBP16.34■□□□□ 0.21
ECHDC3-205ENST00000496136 SLC17A3O00476 420 aa16.33■□□□□ 0.21
ECHDC3-205ENST00000496136 SOCS3O14543 225 aa16.33■□□□□ 0.21
ECHDC3-205ENST00000496136 RGS13O14921 159 aa16.33■□□□□ 0.21
ECHDC3-205ENST00000496136 PSMB3P49720 205 aa16.33■□□□□ 0.21
ECHDC3-205ENST00000496136 ZNF256Q9Y2P7 627 aaPredicted RBP16.33■□□□□ 0.21
ECHDC3-205ENST00000496136 K7EQG2 157 aa16.33■□□□□ 0.2
ECHDC3-205ENST00000496136 RAB14P61106 215 aa16.33■□□□□ 0.2
ECHDC3-205ENST00000496136 PDE6HQ13956 83 aa16.33■□□□□ 0.2
ECHDC3-205ENST00000496136 GUCA2BQ16661 112 aa16.33■□□□□ 0.2
ECHDC3-205ENST00000496136 GPR61Q9BZJ8 451 aa16.33■□□□□ 0.2
ECHDC3-205ENST00000496136 RANP62826 216 aaKnown RBP16.32■□□□□ 0.2
ECHDC3-205ENST00000496136 ZNF331Q9NQX6 463 aaPredicted RBP16.32■□□□□ 0.2
ECHDC3-205ENST00000496136 CMYA5Q8N3K9 4069 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 TRAV2A0A0B4J234 112 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 ZNF253O75346 499 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 IGFL4Q6B9Z1 124 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 C16orf92Q96LL3 132 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 TRAV8-2A0A0B4J237 113 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 FAM24BQ8N5W8 94 aa16.31■□□□□ 0.2
ECHDC3-205ENST00000496136 MGAM2Q2M2H8 2515 aa16.3■□□□□ 0.2
ECHDC3-205ENST00000496136 OR4C46A6NHA9 309 aa16.3■□□□□ 0.2
ECHDC3-205ENST00000496136 ISLRO14498 428 aa16.3■□□□□ 0.2
ECHDC3-205ENST00000496136 CLLU1Q5K131 121 aa16.3■□□□□ 0.2
ECHDC3-205ENST00000496136 SLC50A1Q9BRV3 221 aa16.3■□□□□ 0.2
ECHDC3-205ENST00000496136 UBE2G2P60604 165 aa16.29■□□□□ 0.2
ECHDC3-205ENST00000496136 PSG9Q00887 426 aa16.29■□□□□ 0.2
ECHDC3-205ENST00000496136 SAMD13Q5VXD3 122 aa16.29■□□□□ 0.2
ECHDC3-205ENST00000496136 EXOC3-AS1Q8N2X6 119 aa16.29■□□□□ 0.2
ECHDC3-205ENST00000496136 GNG13Q9P2W3 67 aa16.29■□□□□ 0.2
ECHDC3-205ENST00000496136 PMS2P11Q13670 270 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 BEAN1Q3B7T3 259 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 LYPD1Q8N2G4 141 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 Q9H3A6 140 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 YTHDF2Q9Y5A9 579 aaKnown RBP16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 A0A1W2PRE2 83 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 FAM74A7A6NL05 159 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 G3V4G9 280 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 PAGE4O60829 102 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 HLA-DMBP28068 263 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 ID1P41134 155 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 PPT1P50897 306 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 RNF182Q8N6D2 247 aa16.28■□□□□ 0.2
ECHDC3-205ENST00000496136 ZNF688P0C7X2 276 aa16.27■□□□□ 0.2
ECHDC3-205ENST00000496136 SAMD5Q5TGI4 173 aa16.27■□□□□ 0.2
ECHDC3-205ENST00000496136 C20orf173Q96LM9 149 aa16.27■□□□□ 0.2
ECHDC3-205ENST00000496136 AAMDCQ9H7C9 122 aa16.27■□□□□ 0.2
ECHDC3-205ENST00000496136 PGPA6NDG6 321 aa16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 SNRPD3P62318 126 aaKnown RBP16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 SUMO1P63165 101 aaKnown RBP16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 ICAM4Q14773 271 aa16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 LINC00052Q96N35 136 aa16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 EGFEM1PQ0D2K5 195 aa16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 MANBALQ9NQG1 85 aa16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 CLEC5AQ9NY25 188 aa16.26■□□□□ 0.19
ECHDC3-205ENST00000496136 GGTLC3B5MD39 225 aa16.25■□□□□ 0.19
ECHDC3-205ENST00000496136 PSG3Q16557 428 aa16.25■□□□□ 0.19
ECHDC3-205ENST00000496136 HAGHQ16775 308 aa16.25■□□□□ 0.19
ECHDC3-205ENST00000496136 CST9LP1Q5W188 147 aa16.25■□□□□ 0.19
ECHDC3-205ENST00000496136 OTORQ9NRC9 128 aa16.25■□□□□ 0.19
ECHDC3-205ENST00000496136 ARL2-SNX15V9GYD0 113 aa16.25■□□□□ 0.19
ECHDC3-205ENST00000496136 M0R3E3 92 aa16.24■□□□□ 0.19
ECHDC3-205ENST00000496136 CD7P09564 240 aa16.24■□□□□ 0.19
ECHDC3-205ENST00000496136 PSMG4Q5JS54 123 aa16.24■□□□□ 0.19
ECHDC3-205ENST00000496136 ZNF705FA8MVS1 300 aaPredicted RBP16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 KRTAP10-11P60412 298 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 NKX6-2Q9C056 277 aaPredicted RBP16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 IFNA1P01562 189 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 ODF3L2Q3SX64 289 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 CCDC28AQ8IWP9 274 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 RARRES2Q99969 163 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 MAP6D1Q9H9H5 199 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 NOTCH1P46531 2555 aa16.23■□□□□ 0.19
ECHDC3-205ENST00000496136 RBFOX3A6NFN3 312 aa16.22■□□□□ 0.19
ECHDC3-205ENST00000496136 PRB4P10163 310 aaPredicted RBP16.22■□□□□ 0.19
ECHDC3-205ENST00000496136 BCL2P10415 239 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms