RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 HRH4Q9H3N8 390 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 FBN3Q75N90 2809 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 A8MZ25 164 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 H3BQ15 152 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 H3BTX0 84 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 IGLC2P0DOY2 106 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 HIST1H1EP10412 219 aaKnown RBP10.95□□□□□ -0.66
HDAC9-226ENST00000496026 ZNF124Q15973 351 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 IGFL4Q6B9Z1 124 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 BAP18Q8IXM2 172 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 RPP25LQ8N5L8 163 aaKnown RBP10.95□□□□□ -0.66
HDAC9-226ENST00000496026 CITED4Q96RK1 184 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 SLC50A1Q9BRV3 221 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 ACTR3CQ9C0K3 210 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-226ENST00000496026 RPRMQ9NS64 109 aa10.95□□□□□ -0.66
HDAC9-226ENST00000496026 HMGB3O15347 200 aaKnown RBP10.94□□□□□ -0.66
HDAC9-226ENST00000496026 EIF3GO75821 320 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC9-226ENST00000496026 OR10J4P0C629 311 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 SEC11BP0C7V7 166 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 NKX2-5P52952 324 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-226ENST00000496026 SLC51BQ86UW2 128 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 STOML3Q8TAV4 291 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 BLNKQ8WV28 456 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 RNF141Q8WVD5 230 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 RAB24Q969Q5 203 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 SORL1Q92673 2214 aa10.94□□□□□ -0.66
HDAC9-226ENST00000496026 TRBV19A0A075B6N1 114 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 RBMY1BA6NDE4 496 aaKnown RBP10.93□□□□□ -0.66
HDAC9-226ENST00000496026 RBMY1EA6NEQ0 496 aaKnown RBP10.93□□□□□ -0.66
HDAC9-226ENST00000496026 KNCNA6PVL3 124 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 RBMY1DP0C7P1 496 aaKnown RBP10.93□□□□□ -0.66
HDAC9-226ENST00000496026 UBE2L3P68036 154 aaKnown RBP10.93□□□□□ -0.66
HDAC9-226ENST00000496026 STHQ8IWL8 128 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 RNF182Q8N6D2 247 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 TMED6Q8WW62 240 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 C20orf173Q96LM9 149 aa10.93□□□□□ -0.66
HDAC9-226ENST00000496026 MEGF8Q7Z7M0 2845 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 LOC102724200A0A096LPH7 203 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-226ENST00000496026 SLC17A3O00476 420 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 NBEAP1P0C6P0 100 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
HDAC9-226ENST00000496026 ACTL10Q5JWF8 245 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 EIF5AL1Q6IS14 154 aaKnown RBP10.92□□□□□ -0.66
HDAC9-226ENST00000496026 PQLC2Q6ZP29 291 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 ZNF738Q8NE65 137 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
HDAC9-226ENST00000496026 SAT2Q96F10 170 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-226ENST00000496026 ZNF331Q9NQX6 463 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-226ENST00000496026 UMAD1C9J7I0 102 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 ZNF253O75346 499 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 HLA-DMBP28068 263 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 PSG9Q00887 426 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 PDE6HQ13956 83 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 PSG3Q16557 428 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 ZNF503Q96F45 646 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 B9D2Q9BPU9 175 aa10.91□□□□□ -0.66
HDAC9-226ENST00000496026 CTXND1A0A1B0GTU2 59 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 CXorf1O96002 111 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 STAG3L2P0CL84 134 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 STAG3L3P0CL85 134 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 ARL14EPLP0DKL9 152 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 DEFB1P60022 68 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 EBLN2Q6P2I7 272 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-226ENST00000496026 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 IQCF2Q8IXL9 164 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 ASCL2Q99929 193 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 SAV1Q9H4B6 383 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-226ENST00000496026 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 CLEC5AQ9NY25 188 aa10.9□□□□□ -0.66
HDAC9-226ENST00000496026 F6UB75 175 aa10.89□□□□□ -0.67
HDAC9-226ENST00000496026 NDUFB4O95168 129 aa10.89□□□□□ -0.67
HDAC9-226ENST00000496026 APOC4P55056 127 aa10.89□□□□□ -0.67
HDAC9-226ENST00000496026 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
HDAC9-226ENST00000496026 SSX7Q7RTT5 188 aa10.89□□□□□ -0.67
HDAC9-226ENST00000496026 FAM213BQ8TBF2 198 aa10.89□□□□□ -0.67
HDAC9-226ENST00000496026 H3BMM0 161 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 IGKV3-20P01619 116 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 HLA-DRB4P13762 266 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 GCHFRP30047 84 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 FHITP49789 147 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 RANP62826 216 aaKnown RBP10.88□□□□□ -0.67
HDAC9-226ENST00000496026 HAGHQ16775 308 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 GDF5OSQ5U4N7 250 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 DPPA3Q6W0C5 159 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
HDAC9-226ENST00000496026 SBSPONQ8IVN8 264 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 EXOC3-AS1Q8N2X6 119 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 OR4B1Q8NGF8 309 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
HDAC9-226ENST00000496026 PHYHIPLQ96FC7 376 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 PLA2G2EQ9NZK7 142 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 PRELID1Q9Y255 219 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 HLA-DRB4X5D2U9 266 aa10.88□□□□□ -0.67
HDAC9-226ENST00000496026 A0A0J9YX75 114 aa10.87□□□□□ -0.67
HDAC9-226ENST00000496026 MAP1LC3B2A6NCE7 125 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms