RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MBD3L1Q8WWY6 194 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 GPR146Q96CH1 333 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 TSPAN32Q96QS1 320 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 HSPB9Q9BQS6 159 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 ZNF471Q9BX82 626 aaPredicted RBP2.55□□□□□ -2
CCDC39-207ENST00000495817 TMEM126AQ9H061 195 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 LPAR5Q9H1C0 372 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 GNG8Q9UK08 70 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 ANAPC10Q9UM13 185 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 U3KQ87 197 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 FRYLO94915 3013 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 ATG2BQ96BY7 2078 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 SPEGQ15772 3267 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 A0A087WUU8 490 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 TRGV4A0A0C4DH28 118 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 SIGLEC16A6NMB1 481 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 H7C1C5 153 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 TPST1O60507 370 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 GADD45GO95257 159 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 LGALS1P09382 135 aaKnown RBP2.54□□□□□ -2
CCDC39-207ENST00000495817 KDELR1P24390 212 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 PIGPP57054 158 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 LCN6P62502 163 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 TNFAIP6P98066 277 aaPredicted RBP2.54□□□□□ -2
CCDC39-207ENST00000495817 C12orf74Q32Q52 190 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 LGALS9BQ3B8N2 356 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 LGALS9CQ6DKI2 356 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 ANKRD29Q8N6D5 301 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 ZNF283Q8N7M2 679 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 DAND5Q8N907 189 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 OR13C4Q8NGS5 318 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 OR13C8Q8NGS7 320 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 ZNF675Q8TD23 568 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 CT55Q8WUE5 264 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 PLEKHB2Q96CS7 222 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 CCL13Q99616 98 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 C20orf27Q9GZN8 174 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 CHST6Q9GZX3 395 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 CACYBPQ9HB71 228 aaKnown RBP2.54□□□□□ -2
CCDC39-207ENST00000495817 POPDC3Q9HBV1 291 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 MED11Q9P086 117 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 ERG28Q9UKR5 140 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 PXMP4Q9Y6I8 212 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 MCM3APO60318 1980 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 SIP14410 1827 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 WDFY3Q8IZQ1 3526 aa2.54□□□□□ -2
CCDC39-207ENST00000495817 KMT2BQ9UMN6 2715 aaPredicted RBP2.53□□□□□ -2
CCDC39-207ENST00000495817 DSCAMO60469 2012 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 MUC21A0A0G2JKD1 596 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 MUC21A0A140T8X8 626 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 LY6LH3BQJ8 138 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 K7ERU9 68 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 SLC22A1O15245 554 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 BANF1O75531 89 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 TNFSF15O95150 251 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 HLA-DRB1P01911 266 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 METTL15P1P0C7V9 234 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 CD24P25063 80 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 XCL1P47992 114 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 ATP5G3P48201 142 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 EVX1P49640 407 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 RBM11P57052 281 aaKnown RBP2.53□□□□□ -2
CCDC39-207ENST00000495817 TAS2R30P59541 319 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 HRCT1Q6UXD1 115 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 C20orf196Q8IYI0 205 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 TMEM86AQ8N2M4 240 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 OR4C6Q8NH72 309 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 CLDND2Q8NHS1 167 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 KLF6Q99612 283 aaPredicted RBP2.53□□□□□ -2
CCDC39-207ENST00000495817 MIEN1Q9BRT3 115 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 SMIM3Q9BZL3 60 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 NIT2Q9NQR4 276 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 COQ4Q9Y3A0 265 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 OBSL1O75147 1896 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 ASPMQ8IZT6 3477 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 TECTAO75443 2155 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 MYO9BQ13459 2157 aa2.53□□□□□ -2
CCDC39-207ENST00000495817 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2.01
CCDC39-207ENST00000495817 PTPRBP23467 1997 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 EML6Q6ZMW3 1958 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 NCOR1O75376 2440 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 BRWD1Q9NSI6 2320 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 hCG_1818297A0A087WSY0 165 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 BORCS7-ASMTA0A0B4J1R7 106 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 TRAV4A0A0B4J268 109 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 A0A1B0GW54 56 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 A0A1B0GW64 132 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 PVALEFA0A1B0GWK0 134 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 A8MT66 165 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 C9JCJ5 164 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 CLDN25C9JDP6 229 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 GNRH2O43555 120 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 NDUFC2O95298 119 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 ZNF682O95780 498 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 RPL27AP46776 148 aaKnown RBP2.52□□□□□ -2.01
CCDC39-207ENST00000495817 GABRA2P47869 451 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 HIST1H1AQ02539 215 aaPredicted RBP2.52□□□□□ -2.01
CCDC39-207ENST00000495817 GNA12Q03113 381 aa2.52□□□□□ -2.01
CCDC39-207ENST00000495817 SS18Q15532 418 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms