RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PITX3O75364 302 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 AKR1C4P17516 323 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 FGL1Q08830 312 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 CTF1Q16619 201 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 C4orf46Q504U0 113 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
COL1A1-209ENST00000495677 TRAV9-2A0A087WT02 112 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 PIGBOS1A0A0B4J2F0 54 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 FAM25AB3EWG3 89 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 FAM25CB3EWG5 89 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 FAM25GB3EWG6 89 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 GATA2P23769 480 aaPredicted RBP9.12□□□□□ -0.95
COL1A1-209ENST00000495677 PLP1P60201 277 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 SPCS2Q15005 226 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 LYZL2Q7Z4W2 148 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 TMED4Q7Z7H5 227 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 SHANK2-AS3Q9BTD1 123 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
COL1A1-209ENST00000495677 DISC1C4P0D8 188 aa9.11□□□□□ -0.95
COL1A1-209ENST00000495677 NXPH4O95158 308 aa9.11□□□□□ -0.95
COL1A1-209ENST00000495677 ACOT7LQ6ZUV0 252 aa9.11□□□□□ -0.95
COL1A1-209ENST00000495677 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
COL1A1-209ENST00000495677 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
COL1A1-209ENST00000495677 CXCL2P19875 107 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 RAP2BP61225 183 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 RPP30P78346 268 aaKnown RBP9.1□□□□□ -0.95
COL1A1-209ENST00000495677 MRPS10P82664 201 aaKnown RBP9.1□□□□□ -0.95
COL1A1-209ENST00000495677 KIR3DS1Q14943 382 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 Q6ZTI0 123 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 SYT8Q8NBV8 401 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 RAB2BQ8WUD1 216 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 AP3S1Q92572 193 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 EXTL2Q9UBQ6 330 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 RNF24Q9Y225 148 aa9.1□□□□□ -0.95
COL1A1-209ENST00000495677 DUXBA0A1W2PPF3 345 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 MRPS12O15235 138 aaKnown RBP9.09□□□□□ -0.95
COL1A1-209ENST00000495677 RGS5O15539 181 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 MED6O75586 246 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 C1QBP02746 253 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 SLC25A6P12236 298 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 SRPXP78539 464 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 GFI1BQ5VTD9 330 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 FAAP20Q6NZ36 180 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 LYPD5Q6UWN5 251 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 S100A7AQ86SG5 101 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 LRRC20Q8TCA0 184 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
COL1A1-209ENST00000495677 SCGB3A2Q96PL1 93 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 CIB3Q96Q77 187 aaPredicted RBP9.09□□□□□ -0.95
COL1A1-209ENST00000495677 PRRT1Q99946 306 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 ZNF331Q9NQX6 463 aaPredicted RBP9.09□□□□□ -0.95
COL1A1-209ENST00000495677 HIGD1AQ9Y241 93 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
COL1A1-209ENST00000495677 H3BMQ9 156 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
COL1A1-209ENST00000495677 AKAIN1P0CW23 69 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 SLAQ13239 276 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 CCDC190Q86UF4 302 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 DEFB104AQ8WTQ1 72 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 ODF3Q96PU9 254 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 PRR13Q9NZ81 148 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 MSRB1Q9NZV6 116 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 LY96Q9Y6Y9 160 aa9.08□□□□□ -0.96
COL1A1-209ENST00000495677 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 PAX4O43316 350 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 HYPMO75409 117 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 IL5P05113 134 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 IAPPP10997 89 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 ANXA3P12429 323 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 TMBIM6P55061 237 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 SELENOTP62341 195 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 CYP2G1PQ6ZSU1 146 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 C11orf72Q8NBR9 251 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 ZNF431Q8TF32 576 aaPredicted RBP9.07□□□□□ -0.96
COL1A1-209ENST00000495677 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
COL1A1-209ENST00000495677 NPIPB6E9PJ23 425 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 HAMPP81172 84 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
COL1A1-209ENST00000495677 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 OR51S1Q8NGJ8 323 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 CCDC59Q9P031 241 aaKnown RBP9.06□□□□□ -0.96
COL1A1-209ENST00000495677 PRO0255Q9UI72 69 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 PAIP2BQ9ULR5 123 aaKnown RBP9.06□□□□□ -0.96
COL1A1-209ENST00000495677 UBR4Q5T4S7 5183 aa9.06□□□□□ -0.96
COL1A1-209ENST00000495677 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 PMS2P5A8MQ11 134 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 SYNGR2O43760 224 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 SPINK4O60575 86 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 EVI2AP22794 236 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 AKR1C1Q04828 323 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 ZBTB8BQ8NAP8 495 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms