RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 FAM231BA6NCW3 169 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 K7EQM0 130 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 MRPS12O15235 138 aaKnown RBP12.05□□□□□ -0.48
CALD1-222ENST00000495522 TCF21O43680 179 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 PPBPP02775 128 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 COL8A1P27658 744 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 KRTDAPP60985 99 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 Q56UQ5 140 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
CALD1-222ENST00000495522 CIARTQ8N365 385 aaPredicted RBP12.05□□□□□ -0.48
CALD1-222ENST00000495522 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 ALKBH7Q9BT30 221 aaPredicted RBP12.05□□□□□ -0.48
CALD1-222ENST00000495522 C21orf62Q9NYP8 219 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 RNF114Q9Y508 228 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 ITPR1Q14643 2758 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 EFNA4P52798 201 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 RNASE8Q8TDE3 154 aaKnown RBP12.05□□□□□ -0.48
CALD1-222ENST00000495522 ZNF414Q96IQ9 312 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
CALD1-222ENST00000495522 IGHV2-70DA0A0C4DH43 119 aa12.04□□□□□ -0.48
CALD1-222ENST00000495522 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
CALD1-222ENST00000495522 MAJINQ3KP22 176 aa12.04□□□□□ -0.48
CALD1-222ENST00000495522 OR2D3Q8NGH3 330 aa12.04□□□□□ -0.48
CALD1-222ENST00000495522 COL6A6A6NMZ7 2263 aa12.04□□□□□ -0.48
CALD1-222ENST00000495522 PDE6HQ13956 83 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 C20orf144Q9BQM9 153 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 VAMP8Q9BV40 100 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 C1RLQ9NZP8 487 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 DIRC3C9JPN6 131 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 NDUFS8O00217 210 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 SCGB2A1O75556 95 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 NDUFB8O95169 186 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 FAM106CPP0CH98 169 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 UBE2E1P51965 193 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 COL5A1-AS1Q5SY13 56 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 C16orf54Q6UWD8 224 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 NIT1Q86X76 327 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 PKD1L2Q7Z442 2459 aa12.03□□□□□ -0.48
CALD1-222ENST00000495522 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.48
CALD1-222ENST00000495522 PSG3Q16557 428 aa12.02□□□□□ -0.48
CALD1-222ENST00000495522 TDRG1Q3Y452 100 aa12.02□□□□□ -0.48
CALD1-222ENST00000495522 FAM19A2Q8N3H0 131 aa12.02□□□□□ -0.48
CALD1-222ENST00000495522 Q8N976 141 aa12.02□□□□□ -0.48
CALD1-222ENST00000495522 PSG8Q9UQ74 426 aa12.02□□□□□ -0.48
CALD1-222ENST00000495522 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.49
CALD1-222ENST00000495522 NTF3P20783 257 aa12.02□□□□□ -0.49
CALD1-222ENST00000495522 BCL6BQ8N143 479 aaPredicted RBP12.02□□□□□ -0.49
CALD1-222ENST00000495522 Q8N9W7 124 aa12.02□□□□□ -0.49
CALD1-222ENST00000495522 ITLN2Q8WWU7 325 aaPredicted RBP12.02□□□□□ -0.49
CALD1-222ENST00000495522 ZC2HC1AQ96GY0 325 aa12.02□□□□□ -0.49
CALD1-222ENST00000495522 ACACBO00763 2458 aa12.02□□□□□ -0.49
CALD1-222ENST00000495522 BORCS7Q96B45 105 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 PAM16Q9Y3D7 125 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 C20orf202A1L168 122 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 HSBP1O75506 76 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 Q71RC1 249 aaPredicted RBP12.01□□□□□ -0.49
CALD1-222ENST00000495522 TXN2Q99757 166 aa12.01□□□□□ -0.49
CALD1-222ENST00000495522 C3orf79P0CE67 100 aa12□□□□□ -0.49
CALD1-222ENST00000495522 FAM120AOSQ5T036 256 aa12□□□□□ -0.49
CALD1-222ENST00000495522 FAM162BQ5T6X4 162 aa12□□□□□ -0.49
CALD1-222ENST00000495522 AJUBAQ96IF1 538 aa12□□□□□ -0.49
CALD1-222ENST00000495522 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
CALD1-222ENST00000495522 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 HAX1O00165 279 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 FOXA3P55318 350 aaPredicted RBP11.99□□□□□ -0.49
CALD1-222ENST00000495522 LMO4P61968 165 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
CALD1-222ENST00000495522 MIEN1Q9BRT3 115 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 BPESC1Q9GZL8 116 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 SERTM2A0A1B0GWG4 89 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 M0R3E3 92 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 CHEK1O14757 476 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 CTSGP08311 255 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 RPL7P18124 248 aaKnown RBP11.99□□□□□ -0.49
CALD1-222ENST00000495522 CSN1S1P47710 185 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 PSG9Q00887 426 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
CALD1-222ENST00000495522 FAM110DQ8TAY7 271 aaPredicted RBP11.99□□□□□ -0.49
CALD1-222ENST00000495522 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
CALD1-222ENST00000495522 SPTBN1Q01082 2364 aaKnown RBP11.99□□□□□ -0.49
CALD1-222ENST00000495522 M0R2Z0 102 aa11.98□□□□□ -0.49
CALD1-222ENST00000495522 SAA4P35542 130 aa11.98□□□□□ -0.49
CALD1-222ENST00000495522 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
CALD1-222ENST00000495522 RABAC1Q9UI14 185 aa11.98□□□□□ -0.49
CALD1-222ENST00000495522 APOHP02749 345 aaPredicted RBP11.98□□□□□ -0.49
CALD1-222ENST00000495522 PRR31Q5SQ13 230 aa11.98□□□□□ -0.49
CALD1-222ENST00000495522 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
CALD1-222ENST00000495522 C19orf84I3L1E1 186 aa11.97□□□□□ -0.49
CALD1-222ENST00000495522 S100A7P31151 101 aa11.97□□□□□ -0.49
CALD1-222ENST00000495522 ASCL2Q99929 193 aa11.97□□□□□ -0.49
CALD1-222ENST00000495522 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
CALD1-222ENST00000495522 LOC102724200A0A096LPH7 203 aaPredicted RBP11.96□□□□□ -0.49
CALD1-222ENST00000495522 A0A1B0GUT8 65 aa11.96□□□□□ -0.49
CALD1-222ENST00000495522 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.49
CALD1-222ENST00000495522 CT45A10P0DMU9 189 aa11.96□□□□□ -0.49
CALD1-222ENST00000495522 GNLYP22749 145 aa11.96□□□□□ -0.49
CALD1-222ENST00000495522 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms