RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PSENENQ9NZ42 101 aa6.74□□□□□ -1.33
UBR4-216ENST00000494503 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 A8MTW9 85 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 SNURFLB1AK76 121 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 ADAP1O75689 374 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 GAGE7O76087 117 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 SFT2D2O95562 160 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 RLN2P04090 185 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 SLC25A6P12236 298 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 CXCL3P19876 107 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 TNFSF8P32971 234 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 CDKN1BP46527 198 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 PSG3Q16557 428 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 DYNC2LI1Q8TCX1 351 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
UBR4-216ENST00000494503 C17orf77Q96MU5 243 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 PARD6GQ9BYG4 376 aaPredicted RBP6.73□□□□□ -1.33
UBR4-216ENST00000494503 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 BOLA1Q9Y3E2 137 aa6.73□□□□□ -1.33
UBR4-216ENST00000494503 PLAC8L1A1L4L8 177 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 PMS2P5A8MQ11 134 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 PRSS46E5RG02 174 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 H3BTX0 84 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 H7BYZ3 331 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 GOSR2O14653 212 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 METTL15P1P0C7V9 234 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 M6PRP20645 277 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 INPP1P49441 399 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 POLR2GP62487 172 aaKnown RBP eCLIP6.72□□□□□ -1.33
UBR4-216ENST00000494503 SLC38A11Q08AI6 406 aa6.72□□□□□ -1.33
UBR4-216ENST00000494503 CCDC160A6NGH7 325 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 COX7A2P2O60397 106 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 SELENOTP62341 195 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 ZNF493Q6ZR52 646 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 LRTM2Q8N967 370 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
UBR4-216ENST00000494503 SLC25A21Q9BQT8 299 aaPredicted RBP6.71□□□□□ -1.34
UBR4-216ENST00000494503 ARV1Q9H2C2 271 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 RNF24Q9Y225 148 aa6.71□□□□□ -1.34
UBR4-216ENST00000494503 HSPG2P98160 4391 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 TRGV2A0A075B6R0 118 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 A0A087X0K7 114 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 ZNF701M0R085 212 aaPredicted RBP6.7□□□□□ -1.34
UBR4-216ENST00000494503 CCNKO75909 580 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 S100A5P33763 92 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 TMBIM6P55061 237 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 GFI1BQ5VTD9 330 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 TEPPQ6URK8 271 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 LCN15Q6UWW0 184 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 LINC00305Q7Z4B0 112 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 Q8N1X5 172 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 OR10P1Q8NGE3 313 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 RXFP4Q8TDU9 374 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 SLC50A1Q9BRV3 221 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 SLIRPQ9GZT3 109 aaKnown RBP6.7□□□□□ -1.34
UBR4-216ENST00000494503 GSKIPQ9P0R6 139 aa6.7□□□□□ -1.34
UBR4-216ENST00000494503 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 LINC00854A0A1B0GVQ3 168 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 H3BMQ9 156 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 KRTAP10-2P60368 255 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 C4orf46Q504U0 113 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 ZNF546Q86UE3 836 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 BPIFA4PQ86YQ2 179 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 TRIM63Q969Q1 353 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 Q9H3A6 140 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 TMPRSS5Q9H3S3 457 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 NPVFQ9HCQ7 196 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 PTTG2Q9NZH5 202 aa6.69□□□□□ -1.34
UBR4-216ENST00000494503 C9orf170A2RU37 121 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 SLC17A3O00476 420 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 EREGO14944 169 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 CXCL2P19875 107 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 HOXA5P20719 270 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 LEPP41159 167 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 ESRGQ1W209 222 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 C10orf113Q5VZT2 155 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 BCL7BQ9BQE9 202 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 C20orf144Q9BQM9 153 aa6.68□□□□□ -1.34
UBR4-216ENST00000494503 ZNF331Q9NQX6 463 aaPredicted RBP6.68□□□□□ -1.34
UBR4-216ENST00000494503 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 PRAC2D3DTV9 90 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 L7N2F9 121 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 AGPAT2O15120 278 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 FUSP35637 526 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBR4-216ENST00000494503 BCAP31P51572 246 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 LINC00315P59091 139 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 PLP1P60201 277 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 VAMP2P63027 116 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 ID3Q02535 119 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 IAH1Q2TAA2 248 aaPredicted RBP6.67□□□□□ -1.34
UBR4-216ENST00000494503 TRIQKQ629K1 86 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 PATE2Q6UY27 113 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 Q6ZTI0 123 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms