RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
SYP-208ENST00000494396 OR4C13Q8NGP0 309 aa13.22□□□□□ -0.29
SYP-208ENST00000494396 CRYGCP07315 174 aa13.22□□□□□ -0.29
SYP-208ENST00000494396 GP9P14770 177 aa13.22□□□□□ -0.29
SYP-208ENST00000494396 Q86TA4 180 aa13.22□□□□□ -0.29
SYP-208ENST00000494396 ITLN2Q8WWU7 325 aaPredicted RBP13.22□□□□□ -0.29
SYP-208ENST00000494396 FLYWCH2Q96CP2 140 aaKnown RBP13.22□□□□□ -0.29
SYP-208ENST00000494396 ARFGEF3Q5TH69 2177 aa13.22□□□□□ -0.29
SYP-208ENST00000494396 SPTBN1Q01082 2364 aaKnown RBP13.21□□□□□ -0.29
SYP-208ENST00000494396 TNCP24821 2201 aa13.21□□□□□ -0.29
SYP-208ENST00000494396 hADV38S2A0JD32 116 aa13.21□□□□□ -0.29
SYP-208ENST00000494396 HOXB4P17483 251 aaPredicted RBP13.21□□□□□ -0.29
SYP-208ENST00000494396 NPFFR1Q9GZQ6 430 aa13.21□□□□□ -0.29
SYP-208ENST00000494396 Q9H3A6 140 aa13.21□□□□□ -0.29
SYP-208ENST00000494396 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.29
SYP-208ENST00000494396 LINC00312Q9Y6C7 94 aa13.21□□□□□ -0.29
SYP-208ENST00000494396 A0A0G2JLM5 398 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 CT45A10P0DMU9 189 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 ASPHD1Q5U4P2 390 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 BLNKQ8WV28 456 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 USP24Q9UPU5 2620 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 ABCA4P78363 2273 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 A1L4Q6 167 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 SMAD7O15105 426 aaKnown RBP13.2□□□□□ -0.3
SYP-208ENST00000494396 ZNF137PP52743 207 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 WT1-ASQ06250 92 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 C8orf46Q8TAG6 207 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 PIFOQ8TCI5 191 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
SYP-208ENST00000494396 SAP30O75446 220 aa13.19□□□□□ -0.3
SYP-208ENST00000494396 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
SYP-208ENST00000494396 C8orf31Q8N9H6 132 aa13.19□□□□□ -0.3
SYP-208ENST00000494396 TMEM116Q8NCL8 245 aa13.19□□□□□ -0.3
SYP-208ENST00000494396 MEF2CQ06413 473 aaPredicted RBP13.19□□□□□ -0.3
SYP-208ENST00000494396 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
SYP-208ENST00000494396 TMEM11P17152 192 aa13.18□□□□□ -0.3
SYP-208ENST00000494396 ORM2P19652 201 aa13.18□□□□□ -0.3
SYP-208ENST00000494396 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
SYP-208ENST00000494396 A0A1W2PPM0 123 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 H3BUT2 72 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 FCN3O75636 299 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 MRPL20Q9BYC9 149 aaKnown RBP13.17□□□□□ -0.3
SYP-208ENST00000494396 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 H0Y8G0 127 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 K7EQM0 130 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 ADAMTSL5Q6ZMM2 481 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 TMEM186Q96B77 213 aa13.17□□□□□ -0.3
SYP-208ENST00000494396 OVOL3O00110 214 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 FABP2P12104 132 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 CD24P25063 80 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 ZNF138P52744 262 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 LYPD1Q8N2G4 141 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 U3KQK5 164 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 TMEM189A5PLL7 270 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 CGB1A6NKQ9 187 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 NDUFB3O43676 98 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 PSG3Q16557 428 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 LINC01559Q495D7 138 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 LYPD2Q6UXB3 125 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 RAB1BQ9H0U4 201 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 KAAG1Q9UBP8 84 aa13.16□□□□□ -0.3
SYP-208ENST00000494396 CACNA1BQ00975 2339 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 CSN3P07498 182 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 MC5RP33032 325 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 SGK494Q96LW2 274 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 JMJD8Q96S16 334 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 SPCS1Q9Y6A9 102 aa13.15□□□□□ -0.3
SYP-208ENST00000494396 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
SYP-208ENST00000494396 LGALS7P47929 136 aa13.14□□□□□ -0.31
SYP-208ENST00000494396 HIGD1BQ9P298 99 aa13.14□□□□□ -0.31
SYP-208ENST00000494396 E7EUB6 86 aa13.14□□□□□ -0.31
SYP-208ENST00000494396 CCL3L1P16619 93 aa13.14□□□□□ -0.31
SYP-208ENST00000494396 CTSZQ9UBR2 303 aa13.14□□□□□ -0.31
SYP-208ENST00000494396 HBDP02042 147 aa13.13□□□□□ -0.31
SYP-208ENST00000494396 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
SYP-208ENST00000494396 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
SYP-208ENST00000494396 CIARTQ8N365 385 aaPredicted RBP13.13□□□□□ -0.31
SYP-208ENST00000494396 TNFRSF14Q92956 283 aa13.13□□□□□ -0.31
SYP-208ENST00000494396 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
SYP-208ENST00000494396 LYNX1G3V0Z9 82 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 NCR2O95944 276 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 LYNX1P0DP58 116 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
SYP-208ENST00000494396 MRPL36Q9P0J6 103 aaKnown RBP13.12□□□□□ -0.31
SYP-208ENST00000494396 ZNRD1Q9P1U0 126 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 LRBAP50851 2863 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 HRNRQ86YZ3 2850 aaPredicted RBP13.12□□□□□ -0.31
SYP-208ENST00000494396 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
SYP-208ENST00000494396 LHFPL4Q7Z7J7 247 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms