RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 A0A1B0GXF2 115 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 TCL1BO95988 128 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 IGHMP01871 453 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 CELA2AP08217 269 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 UTF1Q5T230 341 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 ZNF493Q6ZR52 646 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 TECTAO75443 2155 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 UQCRQO14949 82 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 TAL2Q16559 108 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 DEFB133Q30KQ1 61 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 FAM231DQ6ZW35 169 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 NPIPB3Q92617 1050 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 COQ2Q96H96 371 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 ZNF488Q96MN9 340 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 NXT2Q9NPJ8 142 aaKnown RBP5.5□□□□□ -1.53
VPS13B-205ENST00000493587 A0A1B0GX51 115 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 DPM2O94777 84 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 TRACP01848 142 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 CD3EP07766 207 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 IGF2BP2-AS1Q96M15 143 aa5.5□□□□□ -1.53
VPS13B-205ENST00000493587 BEX4Q9NWD9 120 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-205ENST00000493587 CFAP47Q6ZTR5 3102 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 IGHV1OR21-1A0A087WYE8 117 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 A0A0U1RQV1 116 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 A0A1B0GUT8 65 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 D6R8Y8 96 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 NDUFS7O75251 213 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 NDUFA3O95167 84 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 NPYP01303 97 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 HLA-DRB4P13762 266 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 PSMG4Q5JS54 123 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 PIP4P1Q86T03 277 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 MDP1Q86V88 176 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 PDPNQ86YL7 162 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 AMN1Q8IY45 258 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 HLA-DRB4X5D2U9 266 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 BDP1A6H8Y1 2624 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 A0A1W2PNR3 127 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 MORN3Q6PF18 240 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-205ENST00000493587 FAM214BQ7L5A3 538 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 Q8N1Y9 231 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 UCN2Q96RP3 112 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 DSCR8Q96T75 97 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 LINC00527Q9UJ94 153 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 TRAV40A0A0B4J280 105 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 hADV29S1A0JD25 119 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 FRG2CA6NGY1 282 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 RS1O15537 224 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 C8orf88P0DMB2 117 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 RPL13AP40429 203 aaKnown RBP5.49□□□□□ -1.53
VPS13B-205ENST00000493587 ERVK-16P61578 105 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 Q6ZS49 121 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 PIP4P2Q8N4L2 257 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 ZNF503Q96F45 646 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 FSCN3Q9NQT6 498 aa5.49□□□□□ -1.53
VPS13B-205ENST00000493587 KLF13Q9Y2Y9 288 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-205ENST00000493587 IGHV4-39P01824 125 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 NFAM1Q8NET5 270 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-205ENST00000493587 SRSF12Q8WXF0 261 aaKnown RBP5.48□□□□□ -1.53
VPS13B-205ENST00000493587 TMEM158Q8WZ71 300 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 PLPPR2Q96GM1 343 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 OCIAD1Q9NX40 245 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 CHCHD2Q9Y6H1 151 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-205ENST00000493587 LAMA5O15230 3695 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 DMXL1Q9Y485 3027 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 C17orf98A8MV24 154 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 HAX1O00165 279 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 PYYP10082 97 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 DLX6P56179 175 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 PMS2CLQ68D20 193 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 DEFB123Q8N688 67 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 Q8N7P7 452 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 MAPKAPK5-AS1Q8N8E1 139 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 JPT2Q9H910 190 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 SLC25A10Q9UBX3 287 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-205ENST00000493587 PTPRBP23467 1997 aa5.48□□□□□ -1.53
VPS13B-205ENST00000493587 URB1O60287 2271 aaKnown RBP5.48□□□□□ -1.53
VPS13B-205ENST00000493587 LOC400499M0QZD8 3231 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 TEX49A0A1B0GTD5 131 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 A0A1W2PQD3 144 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 PLAUP00749 431 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 CKS2P33552 79 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 SAP25Q8TEE9 199 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 IGFBPL1Q8WX77 278 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 SVILO95425 2214 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 IGLV3-32A0A0A0MS00 114 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 TRAV41A0A0B4J266 112 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 PGPA6NDG6 321 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 H3BMM0 161 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 C20orf204Q6ZNR8 217 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 RNF152Q8N8N0 203 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 MAFAQ8NHW3 353 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-205ENST00000493587 UBE2WQ96B02 151 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 TRGV9Q99603 122 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 PAXXQ9BUH6 204 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 ARFGEF3Q5TH69 2177 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 ABCA1O95477 2261 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms