RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 C6orf52Q5T4I8 152 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 EIF5AL1Q6IS14 154 aaKnown RBP-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 C10orf99Q6UWK7 81 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 PRR15Q8IV56 129 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 OR5D16Q8NGK9 328 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 PLAC4Q8WY50 150 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 POP5Q969H6 163 aaKnown RBP-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 RAB37Q96AX2 223 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 HYLS1Q96M11 299 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 SIGMAR1Q99720 223 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 KIFC1Q9BW19 673 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 WFDC10AQ9H1F0 79 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 NCAPD3P42695 1498 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 NCOR2Q9Y618 2525 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 IGSF10Q6WRI0 2623 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 PCF11O94913 1555 aaKnown RBP-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 CEP164Q9UPV0 1460 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 A0A0J9YY99 117 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 ZNF727A8MUV8 499 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 TMEM256-PLSCR3K7ERE1 68 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 M0R233 179 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 CD14P08571 375 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 CST2P09228 141 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 FXYD4P59646 89 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 DEFA3P59666 94 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 HSPE1P61604 102 aaKnown RBP-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 EIF3IQ13347 325 aaKnown RBP-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 AKIRIN2Q53H80 203 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 TMEM14EPQ6UXP3 125 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 Q6ZQY7 126 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 LINC00299Q6ZSB3 139 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 GOLT1AQ6ZVE7 132 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 BTF3L4Q96K17 158 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 NPCDR1Q9BY65 106 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 TCEAL2Q9H3H9 227 aaPredicted RBP-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 MIA2Q96PC5 1412 aa-0.13□□□□□ -2.43
SYCP1-208ENST00000493377 N4BP2Q86UW6 1770 aaPredicted RBP-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 PIK3C2AO00443 1686 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 ASXL3Q9C0F0 2248 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 FRMPD1Q5SYB0 1578 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 OTOGQ6ZRI0 2925 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 CACNA1HO95180 2353 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 TRAV5A0A0B4J249 113 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 CDKN2CP42773 168 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 SERPINB9P50453 376 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 LIN52Q52LA3 116 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 OR10X1Q8NGY0 326 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 RMND5BQ96G75 393 aaPredicted RBP-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 GGACTQ9BVM4 153 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 POPDC3Q9HBV1 291 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 ARL5AQ9Y689 179 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 BCORL1Q5H9F3 1711 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 CAMSAP1Q5T5Y3 1602 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 CACNA1CQ13936 2221 aa-0.14□□□□□ -2.43
SYCP1-208ENST00000493377 hDV103S1A0JD37 113 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 NUPR2A6NF83 97 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 CRHP06850 196 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 CTXN2P0C2S0 81 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 PDE6GP18545 87 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 KDELR1P24390 212 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 QRFPP83859 136 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 SPA17Q15506 151 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 OCIAD2Q56VL3 154 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 S100A7AQ86SG5 101 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 C10orf111Q8N326 155 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 CHCHD1Q96BP2 118 aaKnown RBP-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 CCL19Q99731 98 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 CACYBPQ9HB71 228 aaKnown RBP-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 ASB4Q9Y574 426 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 ABCA4P78363 2273 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 ADGBQ8N7X0 1667 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 KIAA1549LQ6ZVL6 1849 aa-0.15□□□□□ -2.43
SYCP1-208ENST00000493377 ZFYVE26Q68DK2 2539 aa-0.16□□□□□ -2.43
SYCP1-208ENST00000493377 MYH3P11055 1940 aa-0.16□□□□□ -2.43
SYCP1-208ENST00000493377 CTTNBP2Q8WZ74 1663 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 TRAV23DV6A0A075B6W5 121 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 DUXBA0A1W2PPF3 345 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 PIAS1O75925 651 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 IGHV3-30P01768 117 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 IGHV3-30-5P0DP03 117 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 NFYBP25208 207 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 ASB16-AS1Q495Z4 193 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 FOXI2Q6ZQN5 318 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 PHF5AQ7RTV0 110 aaKnown RBP-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 LRRC18Q8N456 261 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 ZHX1-C8orf76Q96EF9 292 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 BOKQ9UMX3 212 aaPredicted RBP-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 TANC2Q9HCD6 1990 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 TRPM7Q96QT4 1865 aa-0.16□□□□□ -2.44
SYCP1-208ENST00000493377 ESPL1Q14674 2120 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 C9orf170A2RU37 121 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 AIPO00170 330 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 HMGB3O15347 200 aaKnown RBP-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 IFNA4P05014 189 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 ANK1P16157 1881 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 NCALDP61601 193 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 MIR22HGQ0VDD5 57 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 KLRD1Q13241 179 aa-0.17□□□□□ -2.44
SYCP1-208ENST00000493377 ITGB3BPQ13352 177 aaPredicted RBP-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms