RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 H3BP45 60 aa14.81□□□□□ -0.04
PFDN4-205ENST00000493356 IL5P05113 134 aa14.81□□□□□ -0.04
PFDN4-205ENST00000493356 TMEM128Q5BJH2 165 aa14.81□□□□□ -0.04
PFDN4-205ENST00000493356 TMED4Q7Z7H5 227 aa14.81□□□□□ -0.04
PFDN4-205ENST00000493356 RPUSD4Q96CM3 377 aaKnown RBP14.81□□□□□ -0.04
PFDN4-205ENST00000493356 HYPMO75409 117 aa14.8□□□□□ -0.04
PFDN4-205ENST00000493356 ADAP1O75689 374 aa14.8□□□□□ -0.04
PFDN4-205ENST00000493356 SMIM18P0DKX4 95 aa14.8□□□□□ -0.04
PFDN4-205ENST00000493356 KIR3DS1Q14943 382 aa14.8□□□□□ -0.04
PFDN4-205ENST00000493356 SPCS2Q15005 226 aa14.8□□□□□ -0.04
PFDN4-205ENST00000493356 LRRC20Q8TCA0 184 aa14.8□□□□□ -0.04
PFDN4-205ENST00000493356 GAGE12BA1L429 117 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 H3BNG1 76 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 GAGE7O76087 117 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 OR5G3P0C626 314 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 LINC00869P0C866 280 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 GAGE12FP0CL80 117 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 GAGE12GP0CL81 117 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 GAGE12IP0CL82 117 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 VAMP1P23763 118 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 PLP1P60201 277 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 C20orf144Q9BQM9 153 aa14.79□□□□□ -0.04
PFDN4-205ENST00000493356 STRAPQ9Y3F4 350 aaKnown RBP14.79□□□□□ -0.04
PFDN4-205ENST00000493356 SMCO3A2RU48 225 aa14.78□□□□□ -0.04
PFDN4-205ENST00000493356 LINC00315P59091 139 aa14.78□□□□□ -0.04
PFDN4-205ENST00000493356 Q6ZRN7 208 aaPredicted RBP14.78□□□□□ -0.04
PFDN4-205ENST00000493356 RSL24D1Q9UHA3 163 aaKnown RBP14.78□□□□□ -0.04
PFDN4-205ENST00000493356 RLN2P04090 185 aa14.77□□□□□ -0.05
PFDN4-205ENST00000493356 INAFM2P0DMQ5 153 aa14.77□□□□□ -0.05
PFDN4-205ENST00000493356 CCDC28AQ8IWP9 274 aa14.77□□□□□ -0.05
PFDN4-205ENST00000493356 PARD6GQ9BYG4 376 aaPredicted RBP14.77□□□□□ -0.05
PFDN4-205ENST00000493356 PMS2P5A8MQ11 134 aa14.76□□□□□ -0.05
PFDN4-205ENST00000493356 MRPS12O15235 138 aaKnown RBP14.76□□□□□ -0.05
PFDN4-205ENST00000493356 SELENOTP62341 195 aa14.76□□□□□ -0.05
PFDN4-205ENST00000493356 GFI1BQ5VTD9 330 aa14.76□□□□□ -0.05
PFDN4-205ENST00000493356 HOXB5P09067 269 aa14.75□□□□□ -0.05
PFDN4-205ENST00000493356 PATE2Q6UY27 113 aa14.75□□□□□ -0.05
PFDN4-205ENST00000493356 LYPD1Q8N2G4 141 aa14.75□□□□□ -0.05
PFDN4-205ENST00000493356 ZNF331Q9NQX6 463 aaPredicted RBP14.75□□□□□ -0.05
PFDN4-205ENST00000493356 SNURFLB1AK76 121 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 CXCL2P19875 107 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 ANXA7P20073 488 aaKnown RBP14.74□□□□□ -0.05
PFDN4-205ENST00000493356 FAUP35544 74 aaKnown RBP14.74□□□□□ -0.05
PFDN4-205ENST00000493356 LCN15Q6UWW0 184 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 S100A7AQ86SG5 101 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 SOSTQ9BQB4 213 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 ARL6Q9H0F7 186 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 TMPRSS5Q9H3S3 457 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 PGPEP1Q9NXJ5 209 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 CCDC59Q9P031 241 aaKnown RBP14.74□□□□□ -0.05
PFDN4-205ENST00000493356 FAT1Q14517 4588 aa14.74□□□□□ -0.05
PFDN4-205ENST00000493356 A0A096LPF7 62 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 SFT2D2O95562 160 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 FUSP35637 526 aaKnown RBP eCLIP14.73□□□□□ -0.05
PFDN4-205ENST00000493356 XGP55808 180 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 PPP1R1AQ13522 171 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 DYNC2LI1Q8TCX1 351 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 VSIG2Q96IQ7 327 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 ARV1Q9H2C2 271 aa14.73□□□□□ -0.05
PFDN4-205ENST00000493356 PRAC2D3DTV9 90 aa14.72□□□□□ -0.05
PFDN4-205ENST00000493356 SNRPCP09234 159 aaKnown RBP14.72□□□□□ -0.05
PFDN4-205ENST00000493356 ID3Q02535 119 aa14.72□□□□□ -0.05
PFDN4-205ENST00000493356 LCE2DQ5TA82 110 aaPredicted RBP14.72□□□□□ -0.05
PFDN4-205ENST00000493356 CCDC190Q86UF4 302 aa14.72□□□□□ -0.05
PFDN4-205ENST00000493356 SLC50A1Q9BRV3 221 aa14.72□□□□□ -0.05
PFDN4-205ENST00000493356 PTTG2Q9NZH5 202 aa14.72□□□□□ -0.05
PFDN4-205ENST00000493356 RNF24Q9Y225 148 aa14.72□□□□□ -0.05
PFDN4-205ENST00000493356 FABP12A6NFH5 140 aa14.71□□□□□ -0.05
PFDN4-205ENST00000493356 K7EPK0 472 aa14.71□□□□□ -0.05
PFDN4-205ENST00000493356 POLR2GP62487 172 aaKnown RBP eCLIP14.71□□□□□ -0.05
PFDN4-205ENST00000493356 DAZ2Q13117 558 aaKnown RBP14.71□□□□□ -0.05
PFDN4-205ENST00000493356 Q6ZTI0 123 aa14.71□□□□□ -0.05
PFDN4-205ENST00000493356 PSENENQ9NZ42 101 aa14.71□□□□□ -0.05
PFDN4-205ENST00000493356 SIVA1O15304 175 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 CCNKO75909 580 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 TNFSF8P32971 234 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 RRAS2P62070 204 aaPredicted RBP14.7□□□□□ -0.06
PFDN4-205ENST00000493356 Q5VSD8 79 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 CDPF1Q6NVV7 123 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 TRIM63Q969Q1 353 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 SLC25A21Q9BQT8 299 aaPredicted RBP14.7□□□□□ -0.06
PFDN4-205ENST00000493356 MYCBP2O75592 4640 aa14.7□□□□□ -0.06
PFDN4-205ENST00000493356 J3KRW8 73 aa14.69□□□□□ -0.06
PFDN4-205ENST00000493356 SLC17A3O00476 420 aa14.69□□□□□ -0.06
PFDN4-205ENST00000493356 EREGO14944 169 aa14.69□□□□□ -0.06
PFDN4-205ENST00000493356 ERVFC1-1P60608 527 aa14.69□□□□□ -0.06
PFDN4-205ENST00000493356 SLC38A11Q08AI6 406 aa14.69□□□□□ -0.06
PFDN4-205ENST00000493356 ZBTB8BQ8NAP8 495 aaPredicted RBP14.69□□□□□ -0.06
PFDN4-205ENST00000493356 NPVFQ9HCQ7 196 aa14.69□□□□□ -0.06
PFDN4-205ENST00000493356 SRRM2Q9UQ35 2752 aaKnown RBP14.69□□□□□ -0.06
PFDN4-205ENST00000493356 FLG2Q5D862 2391 aaPredicted RBP14.69□□□□□ -0.06
PFDN4-205ENST00000493356 TRAV12-3A0A0B4J271 114 aa14.68□□□□□ -0.06
PFDN4-205ENST00000493356 FNDC10F2Z333 226 aa14.68□□□□□ -0.06
PFDN4-205ENST00000493356 H3BTX0 84 aa14.68□□□□□ -0.06
PFDN4-205ENST00000493356 PXDC1Q5TGL8 231 aa14.68□□□□□ -0.06
PFDN4-205ENST00000493356 LINC00305Q7Z4B0 112 aa14.68□□□□□ -0.06
PFDN4-205ENST00000493356 PYGO2Q9BRQ0 406 aa14.68□□□□□ -0.06
PFDN4-205ENST00000493356 LINC00854A0A1B0GVQ3 168 aa14.67□□□□□ -0.06
PFDN4-205ENST00000493356 SSSCA1O60232 199 aa14.67□□□□□ -0.06
PFDN4-205ENST00000493356 METTL15P1P0C7V9 234 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms