RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 SEC11AP67812 179 aa11.06□□□□□ -0.64
TRIM11-204ENST00000493030 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
TRIM11-204ENST00000493030 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
TRIM11-204ENST00000493030 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
TRIM11-204ENST00000493030 DEFB131AP59861 70 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 PI4KAP42356 2102 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 LINC01549A6NIU2 74 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 VCYO14598 125 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 ARFGEF3Q5TH69 2177 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 SMKR1H3BMG3 65 aa11.05□□□□□ -0.64
TRIM11-204ENST00000493030 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
TRIM11-204ENST00000493030 Q6ZRM9 215 aa11.04□□□□□ -0.64
TRIM11-204ENST00000493030 HSD52Q0P140 79 aa11.04□□□□□ -0.64
TRIM11-204ENST00000493030 DTX1Q86Y01 620 aa11.04□□□□□ -0.64
TRIM11-204ENST00000493030 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
TRIM11-204ENST00000493030 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
TRIM11-204ENST00000493030 ATP6V0E1O15342 81 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 CACNA1HO95180 2353 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
TRIM11-204ENST00000493030 A0A1W2PPI3 338 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 AMBPP02760 352 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 PHF3Q92576 2039 aaKnown RBP11.03□□□□□ -0.64
TRIM11-204ENST00000493030 A6NNC1 897 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 TNFSF13O75888 250 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 ATXN8Q156A1 80 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 RASL10AQ92737 203 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 LINC00479Q96M42 142 aa11.03□□□□□ -0.64
TRIM11-204ENST00000493030 SRSF4Q08170 494 aaKnown RBP11.02□□□□□ -0.64
TRIM11-204ENST00000493030 AMN1Q8IY45 258 aa11.02□□□□□ -0.64
TRIM11-204ENST00000493030 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.64
TRIM11-204ENST00000493030 TMEM158Q8WZ71 300 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 TMEM190Q8WZ59 177 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 PLEKHB2Q96CS7 222 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 Q96MF0 132 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 XCL2Q9UBD3 114 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 COLCA2A8K830 154 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 GUSBP1Q15486 140 aa11.02□□□□□ -0.65
TRIM11-204ENST00000493030 hDV102S1A0JD36 115 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 DKK1O94907 266 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 UBE2E1P51965 193 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 TMEM256Q8N2U0 113 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 Q71RC1 249 aaPredicted RBP11.01□□□□□ -0.65
TRIM11-204ENST00000493030 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 RASL11AQ6T310 242 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 ZNF562Q6V9R5 426 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 COL4A6Q14031 1691 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 A0A1B0GW64 132 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 ZFAND6Q6FIF0 208 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 BCL6BQ8N143 479 aaPredicted RBP11.01□□□□□ -0.65
TRIM11-204ENST00000493030 LAMTOR3Q9UHA4 124 aa11.01□□□□□ -0.65
TRIM11-204ENST00000493030 G3V318 75 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 Q6ZS49 121 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 DOCK8Q8NF50 2099 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 CFHR3Q02985 330 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 Q86TA4 180 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 ARMS2P0C7Q2 107 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 LINC01559Q495D7 138 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 LIME1Q9H400 295 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 DLEU1O43261 78 aa11□□□□□ -0.65
TRIM11-204ENST00000493030 INS-IGF2F8WCM5 200 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 SPXQ9BT56 116 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.99□□□□□ -0.65
TRIM11-204ENST00000493030 IGHV1-69DA0A0B4J2H0 117 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 IGHV1-69P01742 117 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
TRIM11-204ENST00000493030 IGKV1-6A0A0C4DH72 117 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 NDUFB8O95169 186 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 SIP14410 1827 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 ANK1P16157 1881 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 GATA3P23771 443 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 SPINK13Q1W4C9 94 aa10.99□□□□□ -0.65
TRIM11-204ENST00000493030 DUX4L9Q6RFH8 374 aaPredicted RBP10.99□□□□□ -0.65
TRIM11-204ENST00000493030 SSBP2P81877 361 aaPredicted RBP10.99□□□□□ -0.65
TRIM11-204ENST00000493030 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
TRIM11-204ENST00000493030 LY96Q9Y6Y9 160 aa10.98□□□□□ -0.65
TRIM11-204ENST00000493030 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
TRIM11-204ENST00000493030 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
TRIM11-204ENST00000493030 FHL1Q13642 323 aa10.98□□□□□ -0.65
TRIM11-204ENST00000493030 SS18Q15532 418 aa10.98□□□□□ -0.65
TRIM11-204ENST00000493030 C1orf194Q5T5A4 169 aa10.98□□□□□ -0.65
TRIM11-204ENST00000493030 LINC01619G3V211 115 aa10.97□□□□□ -0.65
TRIM11-204ENST00000493030 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
TRIM11-204ENST00000493030 Q6ZR03 302 aa10.97□□□□□ -0.65
TRIM11-204ENST00000493030 KLK9Q9UKQ9 250 aa10.97□□□□□ -0.65
TRIM11-204ENST00000493030 A0A087X0K7 114 aa10.97□□□□□ -0.65
TRIM11-204ENST00000493030 ZC2HC1BQ5TFG8 222 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms