RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 YTHDF2Q9Y5A9 579 aaKnown RBP16.67■□□□□ 0.26
PSPC1-204ENST00000492741 A0A087X0K7 114 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 FAM74A7A6NL05 159 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 TAGLN2P37802 199 aaKnown RBP16.66■□□□□ 0.26
PSPC1-204ENST00000492741 MEOX2P50222 304 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 NDUFA5Q16718 116 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 RBPMS2Q6ZRY4 209 aaKnown RBP16.66■□□□□ 0.26
PSPC1-204ENST00000492741 GBGT1Q8N5D6 347 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 VAX2Q9UIW0 290 aa16.66■□□□□ 0.26
PSPC1-204ENST00000492741 A0A1W2PRE2 83 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 PDE6HQ13956 83 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 RXFP4Q8TDU9 374 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 MDFIQ99750 246 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 NRN1Q9NPD7 142 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 SIGLEC8Q9NYZ4 499 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 LOC102723971A0A1B0GUV8 181 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 C11orf94C9JXX5 98 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 DNASE2O00115 360 aaPredicted RBP16.65■□□□□ 0.26
PSPC1-204ENST00000492741 SLC17A3O00476 420 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 CD33P20138 364 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 SUMO1P63165 101 aaKnown RBP16.65■□□□□ 0.26
PSPC1-204ENST00000492741 DEFB114Q30KQ6 69 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 FAM90A2PQ658T7 463 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 WFDC3Q8IUB2 231 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 Q9H3A6 140 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 ARL2-SNX15V9GYD0 113 aa16.65■□□□□ 0.26
PSPC1-204ENST00000492741 PGPA6NDG6 321 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 NDUFB4O95168 129 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 PAFAH1B2P68402 229 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 PSG9Q00887 426 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 PEA15Q15121 130 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 C16orf92Q96LL3 132 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 NKX6-2Q9C056 277 aaPredicted RBP16.64■□□□□ 0.25
PSPC1-204ENST00000492741 AAMDCQ9H7C9 122 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 TREM1Q9NP99 234 aa16.64■□□□□ 0.25
PSPC1-204ENST00000492741 ATP5G3P48201 142 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 TFPI2P48307 235 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 RIPPLY3P57055 190 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 MEF2BQ02080 365 aaPredicted RBP16.63■□□□□ 0.25
PSPC1-204ENST00000492741 ZNF506Q5JVG8 444 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 SLC7A5P1Q8MH63 180 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 EXOC3-AS1Q8N2X6 119 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 MS4A6AQ9H2W1 248 aa16.63■□□□□ 0.25
PSPC1-204ENST00000492741 ICAM4Q14773 271 aa16.62■□□□□ 0.25
PSPC1-204ENST00000492741 CD300EQ496F6 205 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-204ENST00000492741 LYPD1Q8N2G4 141 aa16.62■□□□□ 0.25
PSPC1-204ENST00000492741 SLC50A1Q9BRV3 221 aa16.62■□□□□ 0.25
PSPC1-204ENST00000492741 ZNF253O75346 499 aa16.62■□□□□ 0.25
PSPC1-204ENST00000492741 SRSF3P84103 164 aaKnown RBP16.62■□□□□ 0.25
PSPC1-204ENST00000492741 IGFL4Q6B9Z1 124 aa16.62■□□□□ 0.25
PSPC1-204ENST00000492741 TXNDC17Q9BRA2 123 aa16.62■□□□□ 0.25
PSPC1-204ENST00000492741 ZNF331Q9NQX6 463 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-204ENST00000492741 GGTLC3B5MD39 225 aa16.61■□□□□ 0.25
PSPC1-204ENST00000492741 TMEM61Q8N0U2 210 aa16.61■□□□□ 0.25
PSPC1-204ENST00000492741 CITED4Q96RK1 184 aa16.61■□□□□ 0.25
PSPC1-204ENST00000492741 OTORQ9NRC9 128 aa16.61■□□□□ 0.25
PSPC1-204ENST00000492741 SLC25A5P05141 298 aaKnown RBP16.6■□□□□ 0.25
PSPC1-204ENST00000492741 CMTM2Q8TAZ6 248 aa16.6■□□□□ 0.25
PSPC1-204ENST00000492741 RPH3ALQ9UNE2 315 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 TSPAN4O14817 238 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 ID1P41134 155 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 CEBPGP53567 150 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 CD81P60033 236 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 SAMD13Q5VXD3 122 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 SPATA3Q8NHX4 192 aa16.59■□□□□ 0.25
PSPC1-204ENST00000492741 TRAV25A0A0B4J276 109 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 PDE6DO43924 150 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 GUCA2BQ16661 112 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 C9orf66Q5T8R8 295 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 UQCC3Q6UW78 93 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 RNF182Q8N6D2 247 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 DCANP1Q8TF63 244 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 MCRIP2Q9BUT9 160 aaKnown RBP16.58■□□□□ 0.24
PSPC1-204ENST00000492741 SMDT1Q9H4I9 107 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 COL6A5A8TX70 2615 aa16.58■□□□□ 0.24
PSPC1-204ENST00000492741 HLA-DMBP28068 263 aa16.57■□□□□ 0.24
PSPC1-204ENST00000492741 CSN1S1P47710 185 aa16.57■□□□□ 0.24
PSPC1-204ENST00000492741 EIF4E3Q8N5X7 224 aaKnown RBP16.57■□□□□ 0.24
PSPC1-204ENST00000492741 LINC00052Q96N35 136 aa16.57■□□□□ 0.24
PSPC1-204ENST00000492741 ISLRO14498 428 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 IGLV1-51P01701 117 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 INSL3P51460 131 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 CCDC28AQ8IWP9 274 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 WFDC9Q8NEX5 89 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 CLEC5AQ9NY25 188 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 TRAV8-2A0A0B4J237 113 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 IZUMO1RA6ND01 250 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 F6UZH7 168 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 M0R3E3 92 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 SOCS3O14543 225 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 EPDR1Q9UM22 224 aa16.56■□□□□ 0.24
PSPC1-204ENST00000492741 SCO2A0A1W2PP80 73 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 C9JQL5 133 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 K7EQG2 157 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 SNRPD3P62318 126 aaKnown RBP16.55■□□□□ 0.24
PSPC1-204ENST00000492741 GNG5P63218 68 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 LCN12Q6JVE5 192 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms