RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SPACA5Q96QH8 159 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 S1PR3Q99500 378 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 KLK15Q9H2R5 256 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 PSENENQ9NZ42 101 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 ZNF580Q9UK33 172 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 ARL2-SNX15V9GYD0 113 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 TRAV24A0A0B4J272 114 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 A0A1W2PP11 408 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 C9JCJ5 164 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 FCN1O00602 326 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 TAX1BP3O14907 124 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 SYNGR2O43760 224 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 PDCD6O75340 191 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 IGF1P05019 195 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 OR10J4P0C629 311 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 PSG1P11464 419 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 GP9P14770 177 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 CDC34P49427 236 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-213ENST00000492506 GNB1P62873 340 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 LTC4SQ16873 150 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 MOB3BQ86TA1 216 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 SAXO1Q8IYX7 474 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 ZNF491Q8N8L2 437 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 OR10X1Q8NGY0 326 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 ST6GALNAC6Q969X2 333 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 UBE2E2Q96LR5 201 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 TNCP24821 2201 aa10.12□□□□□ -0.79
HDAC3-213ENST00000492506 H0YJW9 148 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 HSPB6O14558 160 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 TMEM50AO95807 157 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 C3orf79P0CE67 100 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 IGLC1P0CG04 106 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 PPIFP30405 207 aaKnown RBP10.11□□□□□ -0.79
HDAC3-213ENST00000492506 SSTR5P35346 364 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 HTD2P86397 168 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 SLC38A11Q08AI6 406 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 RFNGQ9Y644 331 aa10.11□□□□□ -0.79
HDAC3-213ENST00000492506 GRIFINA4D1Z8 144 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 J3QR89 54 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 OVOL1O14753 267 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 MT-CO2P00403 227 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 MOSP00540 346 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 CA2P00918 260 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 IGLV1-40P01703 118 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 HIST1H1AQ02539 215 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-213ENST00000492506 Q8N1Y9 231 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 AP1S3Q96PC3 154 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 RASL11BQ9BPW5 248 aa10.1□□□□□ -0.79
HDAC3-213ENST00000492506 A0A1W2PS18 150 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 SNURFLB1AK76 121 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 PAGE4O60829 102 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 SAP30O75446 220 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 TUSC2O75896 110 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 SERPINE2P07093 398 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 TMEM267Q0VDI3 215 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-213ENST00000492506 BVES-AS1Q5T3Y7 98 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
HDAC3-213ENST00000492506 LINC00311Q8N616 119 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 DLX4Q92988 240 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-213ENST00000492506 QTRT1Q9BXR0 403 aaKnown RBP10.09□□□□□ -0.79
HDAC3-213ENST00000492506 C19orf73Q9NVV2 129 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 HERC2O95714 4834 aa10.09□□□□□ -0.79
HDAC3-213ENST00000492506 GAGE10A6NGK3 116 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 A8MZ25 164 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 G3V318 75 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 MPDU1O75352 247 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 SLURP1P55000 103 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 UBE2G1P62253 170 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 ACSM6Q6P461 480 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 TMEM14EPQ6UXP3 125 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 C8orf31Q8N9H6 132 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 C11orf52Q96A22 123 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 OR4C12Q96R67 309 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 VSIRQ9H7M9 311 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 TPSG1Q9NRR2 321 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 RNF24Q9Y225 148 aa10.08□□□□□ -0.8
HDAC3-213ENST00000492506 TRAV34A0A0B4J273 112 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 A6NDN8 102 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 C15orf65H3BRN8 121 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 IGHV4-30-4P0DP06 118 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 PMCHP20382 165 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 CBLN1P23435 193 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 F2RP25116 425 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 RAB9AP51151 201 aa10.07□□□□□ -0.8
HDAC3-213ENST00000492506 KLF5Q13887 457 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-213ENST00000492506 HDHD3Q9BSH5 251 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-213ENST00000492506 UBE2L5PA0A1B0GUS4 154 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 CRYBB3P26998 211 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 LGALS7P47929 136 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 ZNF137PP52743 207 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 CX3CL1P78423 397 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 PSG9Q00887 426 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 VWC2Q2TAL6 325 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 AMMECR1LQ6DCA0 310 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms