RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 A0A1W2PPZ6 126 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 IGHG3P01860 377 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 LOXL3P58215 753 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 OR10J6PQ8NGY7 276 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 RFESDQ8TAC1 157 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 MRPL33O75394 65 aaKnown RBP7.68□□□□□ -1.18
VPS8-225ENST00000492449 IGLV3-19P01714 112 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 FXYD7P58549 80 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 C1orf229Q6ZS94 237 aaPredicted RBP7.68□□□□□ -1.18
VPS8-225ENST00000492449 ANKRD29Q8N6D5 301 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 DNAJC30Q96LL9 226 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 A0A1W2PPI3 338 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 C5orf67F2Z3F1 127 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 NPYP01303 97 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 ZNF134P52741 427 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 ANXA2RQ3ZCQ2 193 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 ZCCHC24Q8N2G6 241 aaKnown RBP7.68□□□□□ -1.18
VPS8-225ENST00000492449 TMEM75Q8N9X5 138 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 SLC25A39Q9BZJ4 359 aaPredicted RBP7.68□□□□□ -1.18
VPS8-225ENST00000492449 DUX1O43812 170 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 TRGV9Q99603 122 aa7.68□□□□□ -1.18
VPS8-225ENST00000492449 A0A1W2PPC4 97 aa7.67□□□□□ -1.18
VPS8-225ENST00000492449 LINC01548A6NM66 108 aa7.67□□□□□ -1.18
VPS8-225ENST00000492449 MRPS21P82921 87 aaKnown RBP7.67□□□□□ -1.18
VPS8-225ENST00000492449 MRPL23Q16540 153 aaKnown RBP7.67□□□□□ -1.18
VPS8-225ENST00000492449 C11orf53Q8IXP5 236 aa7.67□□□□□ -1.18
VPS8-225ENST00000492449 ZNF71Q9NQZ8 489 aaPredicted RBP7.67□□□□□ -1.18
VPS8-225ENST00000492449 GNG12Q9UBI6 72 aa7.67□□□□□ -1.18
VPS8-225ENST00000492449 NCBP2LA6PVI3 153 aaKnown RBP7.67□□□□□ -1.18
VPS8-225ENST00000492449 IGHV3-9P01782 118 aa7.67□□□□□ -1.18
VPS8-225ENST00000492449 LINC01587Q99440 93 aa7.67□□□□□ -1.18
VPS8-225ENST00000492449 NXT2Q9NPJ8 142 aaKnown RBP7.67□□□□□ -1.18
VPS8-225ENST00000492449 HEATR1Q9H583 2144 aaKnown RBP7.67□□□□□ -1.18
VPS8-225ENST00000492449 SPTBN5Q9NRC6 3674 aaKnown RBP7.66□□□□□ -1.18
VPS8-225ENST00000492449 IQCF6A8MYZ5 107 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 CRLF1O75462 422 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 PRSS1P07477 247 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 PLNP26678 52 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 PCOLCEQ15113 449 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 ZFP2Q6ZN57 461 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 FOXC2Q99958 501 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 F5P12259 2224 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 WNT9BO14905 357 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 TBC1D28Q2M2D7 210 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 SPRY4Q9C004 299 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 NDUFA4L2Q9NRX3 87 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 TRANK1O15050 2925 aa7.66□□□□□ -1.18
VPS8-225ENST00000492449 TRAV25A0A0B4J276 109 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 TRAV40A0A0B4J280 105 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 LINC01549A6NIU2 74 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 LMO7DNF2Z398 122 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 TCL1BO95988 128 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 CKS2P33552 79 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 LEPP41159 167 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 SSR4P51571 173 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 RBMXL3Q8N7X1 1067 aaKnown RBP7.65□□□□□ -1.18
VPS8-225ENST00000492449 TMEM14CQ9P0S9 112 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 METRNQ9UJH8 293 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 TMEM213A2RRL7 107 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 FOXG1P55316 489 aaPredicted RBP7.65□□□□□ -1.18
VPS8-225ENST00000492449 LYZL1Q6UWQ5 148 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 WFDC3Q8IUB2 231 aa7.65□□□□□ -1.18
VPS8-225ENST00000492449 TRIOBPQ9H2D6 2365 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 TRAV8-1A0A0A6YYK1 113 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 GRPP07492 148 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 SCGB1C2P0DMR2 95 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 CRIP1P50238 77 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 ERHP84090 104 aaKnown RBP7.65□□□□□ -1.19
VPS8-225ENST00000492449 DEFB133Q30KQ1 61 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 DCTN5Q9BTE1 182 aa7.65□□□□□ -1.19
VPS8-225ENST00000492449 CD7P09564 240 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 SAA2P0DJI9 122 aaPredicted RBP7.64□□□□□ -1.19
VPS8-225ENST00000492449 PF4V1P10720 104 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 OR11H6Q8NGC7 330 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 NPIPB3Q92617 1050 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 MRPL35Q9NZE8 188 aaKnown RBP7.64□□□□□ -1.19
VPS8-225ENST00000492449 SIGLEC9Q9Y336 463 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 LOC107984156A0A0G2JMH3 177 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 PLAUP00749 431 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 SUB1P53999 127 aaKnown RBP eCLIP7.64□□□□□ -1.19
VPS8-225ENST00000492449 ADIPOQQ15848 244 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 MBNL2Q5VZF2 373 aaKnown RBP7.64□□□□□ -1.19
VPS8-225ENST00000492449 Q71RC1 249 aaPredicted RBP7.64□□□□□ -1.19
VPS8-225ENST00000492449 ARL17AQ8IVW1 177 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 TMEM160Q9NX00 188 aa7.64□□□□□ -1.19
VPS8-225ENST00000492449 LGALS1P09382 135 aaKnown RBP7.63□□□□□ -1.19
VPS8-225ENST00000492449 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 OR4C13Q8NGP0 309 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 FLYWCH2Q96CP2 140 aaKnown RBP7.63□□□□□ -1.19
VPS8-225ENST00000492449 ODF3Q96PU9 254 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 SMIM9A6NGZ8 99 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 CGB3P0DN86 165 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 CGB7P0DN87 165 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
VPS8-225ENST00000492449 COX8CQ7Z4L0 72 aa7.63□□□□□ -1.19
VPS8-225ENST00000492449 LRRC75A-AS1Q8N1F1 130 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms