RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PHLDA1Q8WV24 401 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-212ENST00000492407 SEC22AQ96IW7 307 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 RARRES2Q99969 163 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 PBDC1Q9BVG4 233 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 RNF167Q9H6Y7 350 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 C7orf66A4D0T2 115 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 RS1O15537 224 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 OR7C2O60412 319 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 YIF1AO95070 293 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 CFDP00746 253 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-212ENST00000492407 PMP2P02689 132 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 AMBPP02760 352 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 TYMSP04818 313 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.34
HDAC3-212ENST00000492407 ERHP84090 104 aaKnown RBP6.71□□□□□ -1.34
HDAC3-212ENST00000492407 RHEBQ15382 184 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 SLC25A46Q96AG3 418 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 SLC35E1Q96K37 410 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 VSIRQ9H7M9 311 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 LYRM2Q9NU23 88 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-212ENST00000492407 NSG2Q9Y328 171 aa6.71□□□□□ -1.34
HDAC3-212ENST00000492407 MEIS3P1A6NDR6 274 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 C11orf94C9JXX5 98 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 PPP1R2P9O14990 202 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 GNG7O60262 68 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 EIF4EP06730 217 aaKnown RBP6.7□□□□□ -1.34
HDAC3-212ENST00000492407 RAB5AP20339 215 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 HRH1P35367 487 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 TMEM128Q5BJH2 165 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 PVRIGQ6DKI7 326 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 TBC1D26Q86UD7 250 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 ZNF414Q96IQ9 312 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 FXYD6Q9H0Q3 95 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 MED28Q9H204 178 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 COMMD3Q9UBI1 195 aa6.7□□□□□ -1.34
HDAC3-212ENST00000492407 IGHV3-21A0A0B4J1V1 117 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 A0A1W2PS18 150 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 IFITM10A6NMD0 228 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 ZNF207O43670 478 aaKnown RBP6.69□□□□□ -1.34
HDAC3-212ENST00000492407 CD74P04233 296 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 SNCAP37840 140 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 CNN1P51911 297 aaKnown RBP6.69□□□□□ -1.34
HDAC3-212ENST00000492407 SUB1P53999 127 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC3-212ENST00000492407 RND3P61587 244 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 TMEM187Q14656 261 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 TMEM268Q5VZI3 342 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 TOMM20LQ6UXN7 152 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 PHYHIPLQ96FC7 376 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
HDAC3-212ENST00000492407 HERC2O95714 4834 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 IGHV3OR16-8A0A075B7F1 116 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 HMSDA8MTL9 139 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 IFNA1P01562 189 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 IGKV1-39P01597 117 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 IGKV1D-39P04432 117 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 NPPCP23582 126 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 TIRAPP58753 221 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 PHLDA2Q53GA4 152 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 MORN3Q6PF18 240 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-212ENST00000492407 RPP25LQ8N5L8 163 aaKnown RBP6.68□□□□□ -1.34
HDAC3-212ENST00000492407 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
HDAC3-212ENST00000492407 GRAMD2BQ96HH9 432 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 MS4A6AQ9H2W1 248 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 FBXL17Q9UF56 701 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 C14orf166Q9Y224 244 aaKnown RBP6.68□□□□□ -1.34
HDAC3-212ENST00000492407 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
HDAC3-212ENST00000492407 KMT2AQ03164 3969 aa6.68□□□□□ -1.34
HDAC3-212ENST00000492407 ANKRD20A5PA0PJZ0 165 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 CA1P00915 261 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-212ENST00000492407 ORM1P02763 201 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 P0C879 139 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 MIFP14174 115 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 TFPI2P48307 235 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 PRSS54Q6PEW0 395 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 OR51S1Q8NGJ8 323 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 OR4X1Q8NH49 305 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 C15orf40Q8WUR7 153 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 RAB40CQ96S21 281 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 ZFAND3Q9H8U3 227 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 CACFD1Q9UGQ2 172 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
HDAC3-212ENST00000492407 SMIM9A6NGZ8 99 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 INMT-MINDY4F8WBC2 141 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 GZMBP10144 247 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 CRYBB3P26998 211 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 CAV2P51636 162 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 NANOS2P60321 138 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms