RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 FABP1P07148 127 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 P0DMU3 169 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 FAM231AP0DMU4 169 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 FAM231CP0DMU5 169 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 INPP1P49441 399 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 ATP5IP56385 69 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-211ENST00000491581 DAD1P61803 113 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 RHOBP62745 196 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 Q6ZR54 194 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 OR8A1Q8NGG7 326 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 TMEM37Q8WXS4 190 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 C20orf85Q9H1P6 137 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 CACFD1Q9UGQ2 172 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 LSM5Q9Y4Y9 91 aaKnown RBP6.26□□□□□ -1.41
HDAC3-211ENST00000491581 FAM25EA8MYX2 175 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 BOLA2-SMG1P6H3BVE0 249 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 NUP62P37198 522 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-211ENST00000491581 RAP2BP61225 183 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 RPP30P78346 268 aaKnown RBP6.25□□□□□ -1.41
HDAC3-211ENST00000491581 DLK1P80370 383 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 OPCMLQ14982 345 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 PSG3Q16557 428 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 MIC13Q5XKP0 118 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 Q6ZQT7 251 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 LINC00305Q7Z4B0 112 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 C11orf1Q9H5F2 150 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 PFDN2Q9UHV9 154 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 SLC45A2Q9UMX9 530 aa6.25□□□□□ -1.41
HDAC3-211ENST00000491581 DNAH11Q96DT5 4516 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 IGSF23A1L1A6 192 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 TMEM189A5PLL7 270 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 F5H768 121 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 K7EPK0 472 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 EIF3GO75821 320 aaKnown RBP eCLIP6.24□□□□□ -1.41
HDAC3-211ENST00000491581 NUDT3O95989 172 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 INSP01308 110 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 IFNA21P01568 189 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 MEOX2P50222 304 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 PLP1P60201 277 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 TNP2Q05952 138 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 GCSAMLQ5JQS6 135 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 MITD1Q8WV92 249 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 RPUSD4Q96CM3 377 aaKnown RBP6.24□□□□□ -1.41
HDAC3-211ENST00000491581 LINC01587Q99440 93 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 NPVFQ9HCQ7 196 aa6.24□□□□□ -1.41
HDAC3-211ENST00000491581 A0A087X0K7 114 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 NAP1L6A6NFF2 107 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 M0R3E3 92 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 GOSR2O14653 212 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 LYRM1O43325 122 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 DUSP14O95147 198 aaKnown RBP6.23□□□□□ -1.41
HDAC3-211ENST00000491581 RPL7P18124 248 aaKnown RBP6.23□□□□□ -1.41
HDAC3-211ENST00000491581 HOXA5P20719 270 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 ERCC8Q13216 396 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 GFI1BQ5VTD9 330 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 NRARPQ7Z6K4 114 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 OR10P1Q8NGE3 313 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 LRRC20Q8TCA0 184 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 NOP10Q9NPE3 64 aaKnown RBP6.23□□□□□ -1.41
HDAC3-211ENST00000491581 ZNF331Q9NQX6 463 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-211ENST00000491581 NUDT15Q9NV35 164 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 ZNF586Q9NXT0 402 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 MGAT4CQ9UBM8 478 aa6.23□□□□□ -1.41
HDAC3-211ENST00000491581 TRAV12-3A0A0B4J271 114 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 A0A0J9YY99 117 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 UBE2L5PA0A1B0GUS4 154 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 C5orf51A6NDU8 294 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 TSC22D2O75157 780 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 SIX6O95475 246 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 CFDP00746 253 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-211ENST00000491581 TCRBP04435 133 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 CT45A10P0DMU9 189 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 IGLC2P0DOY2 106 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 PYYP10082 97 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
HDAC3-211ENST00000491581 BCAP31P51572 246 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 CAV2P51636 162 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 S100A10P60903 97 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 RAB32Q13637 225 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 LGALS9BQ3B8N2 356 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 SPATA31B1PQ5VZV4 182 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 RNF141Q8WVD5 230 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-211ENST00000491581 GPR82Q96P67 336 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 LINC00588Q9Y4M8 146 aa6.22□□□□□ -1.41
HDAC3-211ENST00000491581 GAGE12BA1L429 117 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 ZNF701M0R085 212 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-211ENST00000491581 COX7A2P2O60397 106 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 GAGE7O76087 117 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 CAMLGP49069 296 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 OXA1LQ15070 435 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms