RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 J3QLI3 93 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 NDPQ00604 133 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 C5orf56Q8N8D9 126 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 GPR82Q96P67 336 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 Q9H3A6 140 aa9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
SRGAP3-210ENST00000491467 TRBV7-1A0A0A6YYK4 115 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 SERTM2A0A1B0GWG4 89 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 K7EQM0 130 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 IL4P05112 153 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 MEOX2P50222 304 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 PSG9Q00887 426 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 WDR73Q6P4I2 378 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 BLNKQ8WV28 456 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 TRAPPC1Q9Y5R8 145 aa9.31□□□□□ -0.92
SRGAP3-210ENST00000491467 TRBV19A0A075B6N1 114 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 F8W735 103 aaPredicted RBP9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 H3BUA1 57 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 BMPR1BO00238 502 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 ATP6V0E1O15342 81 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 GATCO43716 136 aaKnown RBP9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF253O75346 499 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 OR2J3O76001 311 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 MT-ND6P03923 174 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 TCRAP04437 139 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 CTSGP08311 255 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 S100A2P29034 98 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 KLF17Q5JT82 389 aaPredicted RBP9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 LINC01356Q8N9X3 169 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 EEF1AKMT3Q96AZ1 226 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 C7orf69Q9H7B7 122 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF586Q9NXT0 402 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF492Q9P255 531 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 PCLOQ9Y6V0 5065 aa9.3□□□□□ -0.92
SRGAP3-210ENST00000491467 TRAV40A0A0B4J280 105 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 FAM223BA6NKX1 122 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 IGLC2P0DOY2 106 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 OR5I1Q13606 314 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 FAM223AQ8IWN6 122 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 TMEM183AQ8IXX5 376 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 PIFOQ8TCI5 191 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 GRAMD2BQ96HH9 432 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 HSPB9Q9BQS6 159 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 MLST8Q9BVC4 326 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF580Q9UK33 172 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 ZFP30Q9Y2G7 519 aa9.29□□□□□ -0.92
SRGAP3-210ENST00000491467 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF705GA8MUZ8 300 aaPredicted RBP9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 LTAP01374 205 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 IGF1P05019 195 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 RHOGP84095 191 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 CT83Q5H943 113 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF414Q96IQ9 312 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 C12orf57Q99622 126 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
SRGAP3-210ENST00000491467 RYR2Q92736 4967 aa9.27□□□□□ -0.92
SRGAP3-210ENST00000491467 TRAV41A0A0B4J266 112 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 FAM231BA6NCW3 169 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 A6NDX4 124 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 SLC17A3O00476 420 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 S100A12P80511 92 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 ATP5G2Q06055 141 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 USF2Q15853 346 aaPredicted RBP9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 ECSCRQ19T08 205 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 C15orf32Q32M92 178 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 OR4B1Q8NGF8 309 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 WIPF2Q8TF74 440 aaPredicted RBP9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 HIF1ANQ9NWT6 349 aa9.27□□□□□ -0.93
SRGAP3-210ENST00000491467 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 OR2T8A6NH00 312 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 A8MWL6 223 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 TGFAP01135 160 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 IGHG2P01859 326 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 CSN1S1P47710 185 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 FAM209BQ5JX69 171 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 SIGLEC15Q6ZMC9 328 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 OR8I2Q8N0Y5 310 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms