RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 GUK1Q16774 197 aa16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 CD300EQ496F6 205 aaPredicted RBP16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 TMEM61Q8N0U2 210 aa16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 NRN1Q9NPD7 142 aa16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 GNG13Q9P2W3 67 aa16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 CMYA5Q8N3K9 4069 aa16.38■□□□□ 0.21
VCPKMT-204ENST00000491402 SLC17A3O00476 420 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 MEOX2P50222 304 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 PDE6HQ13956 83 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 NDUFB4O95168 129 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 IGLV1-51P01701 117 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 PPT1P50897 306 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 UBE2G2P60604 165 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 RBPMS2Q6ZRY4 209 aaKnown RBP16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 GBGT1Q8N5D6 347 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 MS4A6AQ9H2W1 248 aa16.36■□□□□ 0.21
VCPKMT-204ENST00000491402 PMS2P11Q13670 270 aa16.35■□□□□ 0.21
VCPKMT-204ENST00000491402 MCRIP2Q9BUT9 160 aaKnown RBP16.35■□□□□ 0.21
VCPKMT-204ENST00000491402 MANBALQ9NQG1 85 aa16.35■□□□□ 0.21
VCPKMT-204ENST00000491402 TSPAN4O14817 238 aa16.34■□□□□ 0.21
VCPKMT-204ENST00000491402 INSL3P51460 131 aa16.34■□□□□ 0.21
VCPKMT-204ENST00000491402 RANP62826 216 aaKnown RBP16.34■□□□□ 0.21
VCPKMT-204ENST00000491402 C9orf66Q5T8R8 295 aa16.34■□□□□ 0.21
VCPKMT-204ENST00000491402 DCANP1Q8TF63 244 aa16.34■□□□□ 0.21
VCPKMT-204ENST00000491402 YTHDF2Q9Y5A9 579 aaKnown RBP16.34■□□□□ 0.21
VCPKMT-204ENST00000491402 FAM74A7A6NL05 159 aa16.33■□□□□ 0.21
VCPKMT-204ENST00000491402 PAGE4O60829 102 aa16.33■□□□□ 0.21
VCPKMT-204ENST00000491402 ZNF253O75346 499 aa16.33■□□□□ 0.21
VCPKMT-204ENST00000491402 HAGHQ16775 308 aa16.33■□□□□ 0.21
VCPKMT-204ENST00000491402 ZNF331Q9NQX6 463 aaPredicted RBP16.33■□□□□ 0.21
VCPKMT-204ENST00000491402 ARL2-SNX15V9GYD0 113 aa16.33■□□□□ 0.21
VCPKMT-204ENST00000491402 TRAV25A0A0B4J276 109 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 A0A1W2PRE2 83 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 IZUMO1RA6ND01 250 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 SOCS3O14543 225 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 IFNA1P01562 189 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 IGLL1P15814 213 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 SLC50A1Q9BRV3 221 aa16.33■□□□□ 0.2
VCPKMT-204ENST00000491402 BCL2P10415 239 aa16.32■□□□□ 0.2
VCPKMT-204ENST00000491402 TFPI2P48307 235 aa16.32■□□□□ 0.2
VCPKMT-204ENST00000491402 PAFAH1B2P68402 229 aa16.32■□□□□ 0.2
VCPKMT-204ENST00000491402 OR2K2Q8NGT1 345 aa16.32■□□□□ 0.2
VCPKMT-204ENST00000491402 FAM210AQ96ND0 272 aa16.32■□□□□ 0.2
VCPKMT-204ENST00000491402 Q9H3A6 140 aa16.32■□□□□ 0.2
VCPKMT-204ENST00000491402 NBEAL1Q6ZS30 2694 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 GGTLC3B5MD39 225 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 DNASE2O00115 360 aaPredicted RBP16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 PSG9Q00887 426 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 CST9LP1Q5W188 147 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 WFDC3Q8IUB2 231 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 LYPD1Q8N2G4 141 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 EXOC3-AS1Q8N2X6 119 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 C16orf92Q96LL3 132 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 NOTCH1P46531 2555 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 IGFL4Q6B9Z1 124 aa16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 SPAG8Q99932 426 aaPredicted RBP16.31■□□□□ 0.2
VCPKMT-204ENST00000491402 SORL1Q92673 2214 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 TRAV8-2A0A0B4J237 113 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 RBFOX3A6NFN3 312 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 K7EQG2 157 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 TOR2AQ5JU69 321 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 SAMD13Q5VXD3 122 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 RARRES2Q99969 163 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 AAMDCQ9H7C9 122 aa16.3■□□□□ 0.2
VCPKMT-204ENST00000491402 LOC102723971A0A1B0GUV8 181 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 ISLRO14498 428 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 TAGLN2P37802 199 aaKnown RBP16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 ATP5G3P48201 142 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 OXLD1Q5BKU9 147 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 LCN12Q6JVE5 192 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 NKX6-2Q9C056 277 aaPredicted RBP16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 EIF5A2Q9GZV4 153 aaKnown RBP16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 OTORQ9NRC9 128 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 MED9Q9NWA0 146 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 VAX2Q9UIW0 290 aa16.29■□□□□ 0.2
VCPKMT-204ENST00000491402 TRAV2A0A0B4J234 112 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 LINC00862A6NCI5 91 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 PGPA6NDG6 321 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 C11orf94C9JXX5 98 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 SUMO1P63165 101 aaKnown RBP16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 MEF2BQ02080 365 aaPredicted RBP16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 ICAM4Q14773 271 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 GUCA2BQ16661 112 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 RNF182Q8N6D2 247 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 HLA-DMBP28068 263 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 FAM24BQ8N5W8 94 aa16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 ZNF256Q9Y2P7 627 aaPredicted RBP16.28■□□□□ 0.2
VCPKMT-204ENST00000491402 WIPF1O43516 503 aa16.27■□□□□ 0.2
VCPKMT-204ENST00000491402 ZNF506Q5JVG8 444 aa16.27■□□□□ 0.2
VCPKMT-204ENST00000491402 CCDC28AQ8IWP9 274 aa16.27■□□□□ 0.2
VCPKMT-204ENST00000491402 OR4C46A6NHA9 309 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 M0R3E3 92 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 RXFP4Q8TDU9 374 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 TXNDC17Q9BRA2 123 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 ZNF688P0C7X2 276 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 ID1P41134 155 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 CD81P60033 236 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 SRSF3P84103 164 aaKnown RBP16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 COMMD7Q86VX2 200 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms