RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SAA2P0DJI9 122 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 IGLL1P15814 213 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 NTF3P20783 257 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 HNF1AP20823 631 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 GATA2P23769 480 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CEACAM8P31997 349 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 GPR183P32249 361 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 BMI1P35226 326 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SSTR5P35346 364 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CEACAM3P40198 252 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CAMPP49913 170 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF137PP52743 207 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 BPIFB3P59826 476 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 UBE2G1P62253 170 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ARF6P62330 175 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SEC11AP67812 179 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 TNFAIP6P98066 277 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 PSG9Q00887 426 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 EDDM3AQ14507 147 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 VAMP3Q15836 100 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 C3AR1Q16581 482 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 LTC4SQ16873 150 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SPINK9Q5DT21 86 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SPATA31B1PQ5VZV4 182 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM53AQ6NSI3 398 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 MRPL54Q6P161 138 aaKnown RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 EBLN2Q6P2I7 272 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A34Q6PIV7 304 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF493Q6ZR52 646 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 GTF2H5Q6ZYL4 71 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 LINC00305Q7Z4B0 112 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 DEFB125Q8N687 156 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 TPRX1Q8N7U7 411 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CNEP1R1Q8N9A8 125 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 C5orf17Q8NAS9 161 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 GATD1Q8NB37 220 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM116Q8NCL8 245 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 NUP37Q8NFH4 326 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4F17Q8NGA8 305 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4C5Q8NGB2 326 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 OR10W1Q8NGF6 305 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 OR10X1Q8NGY0 326 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 OR9G1Q8NH87 305 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ITLN1Q8WWA0 313 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 C22orf15Q8WYQ4 148 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ST6GALNAC6Q969X2 333 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 FXYD5Q96DB9 178 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SNRNP40Q96DI7 357 aaKnown RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 KCNS1Q96KK3 526 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 IGF2BP2-AS1Q96M15 143 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 AP1S3Q96PC3 154 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CCL13Q99616 98 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 LITAFQ99732 161 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM110AQ9BQ89 295 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 PRO3102Q9H379 93 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 NGBQ9NPG2 151 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 OTORQ9NRC9 128 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF355PQ9NSJ1 428 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM160Q9NX00 188 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM14CQ9P0S9 112 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SMPXQ9UHP9 88 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF835Q9Y2P0 537 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 WASHC3Q9Y3C0 194 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 INSIG2Q9Y5U4 225 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 RAI1Q7Z5J4 1906 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 BRWD1Q9NSI6 2320 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CHD9Q3L8U1 2897 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 IGKV1D-37A0A075B6S9 117 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV3OR15-7A0A075B7D8 119 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV34A0A0B4J273 112 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV3-64DA0A0J9YX35 117 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1B0GUS0 222 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1B0GXF2 115 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM189A5PLL7 270 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 A6NDN8 102 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4C46A6NHA9 309 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 FABP5P3A8MUU1 101 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 E7EUB6 86 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 F2Z2F3 143 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 G3V4G9 280 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM178BH3BS89 294 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 M0R1B8 84 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 ENSAO43768 121 aaKnown RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 CRLF1O75462 422 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 CEACAM4O75871 244 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 LTAP01374 205 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV1-46P01743 117 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV3-7P01780 117 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TCRAP04437 139 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM13P0DJ93 91 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 COX8AP10176 69 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 DEFA4P12838 97 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 ORM2P19652 201 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 GPR6P46095 362 aaPredicted RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TFPI2P48307 235 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 HINT1P49773 126 aaPredicted RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 RAB9AP51151 201 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 KRTAP10-5P60370 271 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 HBBP68871 147 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC35B1P78383 322 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms