RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839		Q6ZRN7	208 aa	Predicted RBP	10.51	□□□□□ -0.73
AGAP3-222	ENST00000490839	ACOT7L	Q6ZUV0	252 aa		10.51	□□□□□ -0.73
AGAP3-222	ENST00000490839	RPUSD4	Q96CM3	377 aa	Known RBP	10.51	□□□□□ -0.73
AGAP3-222	ENST00000490839	NAA50	Q9GZZ1	169 aa	Known RBP	10.51	□□□□□ -0.73
AGAP3-222	ENST00000490839	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.51	□□□□□ -0.73
AGAP3-222	ENST00000490839	RABL2B	Q9UNT1	228 aa		10.51	□□□□□ -0.73
AGAP3-222	ENST00000490839	GAGE12B	A1L429	117 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	EREG	O14944	169 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	GAGE7	O76087	117 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	GAGE12F	P0CL80	117 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	GAGE12G	P0CL81	117 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	GAGE12I	P0CL82	117 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	IL18	Q14116	193 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839		Q5VSD8	79 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	CCDC28A	Q8IWP9	274 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	LRRC20	Q8TCA0	184 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	FRZB	Q92765	325 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	MCUB	Q9NWR8	336 aa		10.5	□□□□□ -0.73
AGAP3-222	ENST00000490839	CTDSP2	O14595	271 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	SYNGR2	O43760	224 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	HYPM	O75409	117 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	IL5	P05113	134 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	CXCL2	P19875	107 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	XG	P55808	180 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	ERVFC1-1	P60608	527 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	CYP2G1P	Q6ZSU1	146 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	S100A7A	Q86SG5	101 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	LRTM2	Q8N967	370 aa		10.49	□□□□□ -0.73
AGAP3-222	ENST00000490839	SNURFL	B1AK76	121 aa		10.48	□□□□□ -0.73
AGAP3-222	ENST00000490839	WRB	O00258	174 aa		10.48	□□□□□ -0.73
AGAP3-222	ENST00000490839	PLP1	P60201	277 aa		10.48	□□□□□ -0.73
AGAP3-222	ENST00000490839	SPANXN5	Q5MJ07	72 aa		10.48	□□□□□ -0.73
AGAP3-222	ENST00000490839	DIRAS2	Q96HU8	199 aa		10.48	□□□□□ -0.73
AGAP3-222	ENST00000490839	SMCO3	A2RU48	225 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839		H3BP45	60 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	OR5G3	P0C626	314 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	LINC00869	P0C866	280 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	SELENOT	P62341	195 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	TMEM128	Q5BJH2	165 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	GFI1B	Q5VTD9	330 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	LCN15	Q6UWW0	184 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	TMPRSS5	Q9H3S3	457 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	RNF24	Q9Y225	148 aa		10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	STRAP	Q9Y3F4	350 aa	Known RBP	10.47	□□□□□ -0.73
AGAP3-222	ENST00000490839	SRRM2	Q9UQ35	2752 aa	Known RBP	10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839		A0A096LPF7	62 aa		10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	SIVA1	O15304	175 aa		10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	PRB4	P10163	310 aa	Predicted RBP	10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	DAZ2	Q13117	558 aa	Known RBP	10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	KIR3DS1	Q14943	382 aa		10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	TMED4	Q7Z7H5	227 aa		10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.46	□□□□□ -0.73
AGAP3-222	ENST00000490839	MRPS12	O15235	138 aa	Known RBP	10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	VAMP1	P23763	118 aa		10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	FUS	P35637	526 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	VSIG2	Q96IQ7	327 aa		10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	SLC50A1	Q9BRV3	221 aa		10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	RSL24D1	Q9UHA3	163 aa	Known RBP	10.45	□□□□□ -0.74
AGAP3-222	ENST00000490839	PMS2P5	A8MQ11	134 aa		10.44	□□□□□ -0.74
AGAP3-222	ENST00000490839		Q6ZTI0	123 aa		10.44	□□□□□ -0.74
AGAP3-222	ENST00000490839	CCDC190	Q86UF4	302 aa		10.44	□□□□□ -0.74
AGAP3-222	ENST00000490839	C18orf15	Q96N68	181 aa		10.44	□□□□□ -0.74
AGAP3-222	ENST00000490839	ARV1	Q9H2C2	271 aa		10.44	□□□□□ -0.74
AGAP3-222	ENST00000490839		K7EPK0	472 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	NXPH4	O95158	308 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	IFNA5	P01569	189 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	ANXA7	P20073	488 aa	Known RBP	10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	FAU	P35544	74 aa	Known RBP	10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	KRTAP10-1	P60331	282 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	PXDC1	Q5TGL8	231 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	NFE4	Q86UQ8	179 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	PYGO2	Q9BRQ0	406 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	ARL6	Q9H0F7	186 aa		10.43	□□□□□ -0.74
AGAP3-222	ENST00000490839	TRGV2	A0A075B6R0	118 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	PRAC2	D3DTV9	90 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	SFT2D2	O95562	160 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	LEP	P41159	167 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	ICAM4	Q14773	271 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	SPCS2	Q15005	226 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	PATE2	Q6UY27	113 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839	ODF3	Q96PU9	254 aa		10.42	□□□□□ -0.74
AGAP3-222	ENST00000490839		A0A087WTM6	91 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	TRAV12-3	A0A0B4J271	114 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	FNDC10	F2Z333	226 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	HOXB5	P09067	269 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	DNAH10OS	P0CZ25	163 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	SMIM18	P0DKX4	95 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	ID3	Q02535	119 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	BPIFA4P	Q86YQ2	179 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	ZNF680	Q8NEM1	530 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	CCDC59	Q9P031	241 aa	Known RBP	10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839	ICOS	Q9Y6W8	199 aa		10.41	□□□□□ -0.74
AGAP3-222	ENST00000490839		J3KRW8	73 aa		10.4	□□□□□ -0.74
AGAP3-222	ENST00000490839	SLC17A3	O00476	420 aa		10.4	□□□□□ -0.74
AGAP3-222	ENST00000490839	POLR2G	P62487	172 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
AGAP3-222	ENST00000490839	PPP1R1A	Q13522	171 aa		10.4	□□□□□ -0.74
AGAP3-222	ENST00000490839	C4orf46	Q504U0	113 aa		10.4	□□□□□ -0.74
AGAP3-222	ENST00000490839	LINC00305	Q7Z4B0	112 aa		10.4	□□□□□ -0.74
AGAP3-222	ENST00000490839	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms