RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 LINC00869P0C866 280 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 HOXA5P20719 270 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 KRTAP10-2P60368 255 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 ARL16Q0P5N6 197 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 PYDC2Q56P42 97 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 MORN5Q5VZ52 161 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 TMEM14EPQ6UXP3 125 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
COL2A1-207ENST00000490609 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
COL2A1-207ENST00000490609 PIGBOS1A0A0B4J2F0 54 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 C9orf170A2RU37 121 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 K7EPK0 472 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
COL2A1-207ENST00000490609 TMEM256Q8N2U0 113 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 RPUSD4Q96CM3 377 aaKnown RBP10.77□□□□□ -0.69
COL2A1-207ENST00000490609 SMIM8Q96KF7 97 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 Q9H8V8 135 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 PSENENQ9NZ42 101 aa10.77□□□□□ -0.69
COL2A1-207ENST00000490609 TIMM8BQ9Y5J9 83 aaPredicted RBP10.77□□□□□ -0.69
COL2A1-207ENST00000490609 OR5G3P0C626 314 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 HTN1P15515 57 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 FAUP35544 74 aaKnown RBP10.76□□□□□ -0.69
COL2A1-207ENST00000490609 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
COL2A1-207ENST00000490609 RHOBP62745 196 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 ESRGQ1W209 222 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 CCDC190Q86UF4 302 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 Q8N1X5 172 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 ARL6Q9H0F7 186 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 ZNF331Q9NQX6 463 aaPredicted RBP10.76□□□□□ -0.69
COL2A1-207ENST00000490609 FLVCR2Q9UPI3 526 aa10.76□□□□□ -0.69
COL2A1-207ENST00000490609 SMCO3A2RU48 225 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 SLC17A3O00476 420 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 CDKN1BP46527 198 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 CCL18P55774 89 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 RAP2BP61225 183 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 DLK1P80370 383 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 SLC38A11Q08AI6 406 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 SPATA12Q7Z6I5 190 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
COL2A1-207ENST00000490609 TMEM37Q8WXS4 190 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 ARV1Q9H2C2 271 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 MYCBP2O75592 4640 aa10.75□□□□□ -0.69
COL2A1-207ENST00000490609 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 ZNF701M0R085 212 aaPredicted RBP10.74□□□□□ -0.69
COL2A1-207ENST00000490609 SSSCA1O60232 199 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 METTL15P1P0C7V9 234 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 AP3S2P59780 193 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 SELENOTP62341 195 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 ZNF493Q6ZR52 646 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 SAT2Q96F10 170 aaPredicted RBP10.74□□□□□ -0.69
COL2A1-207ENST00000490609 NPVFQ9HCQ7 196 aa10.74□□□□□ -0.69
COL2A1-207ENST00000490609 SRRM2Q9UQ35 2752 aaKnown RBP10.73□□□□□ -0.69
COL2A1-207ENST00000490609 LINC00854A0A1B0GVQ3 168 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 FNDC10F2Z333 226 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 H3BQ15 152 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 H3BTX0 84 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 UBE2MP61081 183 aaKnown RBP10.73□□□□□ -0.69
COL2A1-207ENST00000490609 RXFP4Q8TDU9 374 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 DEDD2Q8WXF8 326 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 Q9H3A6 140 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 RCL1Q9Y2P8 373 aaKnown RBP10.73□□□□□ -0.69
COL2A1-207ENST00000490609 DNAH8Q96JB1 4490 aa10.73□□□□□ -0.69
COL2A1-207ENST00000490609 A0A0J9YY99 117 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 H7BYZ3 331 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 CT45A10P0DMU9 189 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 IGLC2P0DOY2 106 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 BTCP35070 178 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 OR5I1Q13606 314 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 BAK1Q16611 211 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 C4orf46Q504U0 113 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 LINC00305Q7Z4B0 112 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 ZNF503Q96F45 646 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 SDHCQ99643 169 aaPredicted RBP10.72□□□□□ -0.69
COL2A1-207ENST00000490609 UPK3BQ9BT76 320 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 SRRQ9GZT4 340 aa10.72□□□□□ -0.69
COL2A1-207ENST00000490609 AGPAT2O15120 278 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 NDUFB6O95139 128 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 OR4E1P0C645 316 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 CXCL2P19875 107 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 S100A7P31151 101 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 TEPPQ6URK8 271 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 Q6ZRN7 208 aaPredicted RBP10.71□□□□□ -0.69
COL2A1-207ENST00000490609 GNPNAT1Q96EK6 184 aaPredicted RBP10.71□□□□□ -0.69
COL2A1-207ENST00000490609 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 MGST2Q99735 147 aa10.71□□□□□ -0.69
COL2A1-207ENST00000490609 GAGE12BA1L429 117 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 NOL3O60936 208 aaKnown RBP10.7□□□□□ -0.7
COL2A1-207ENST00000490609 GAGE7O76087 117 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 GAGE12FP0CL80 117 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 GAGE12GP0CL81 117 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 GAGE12IP0CL82 117 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 ANXA7P20073 488 aaKnown RBP10.7□□□□□ -0.7
COL2A1-207ENST00000490609 M6PRP20645 277 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 CLINT1Q14677 625 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 OPCMLQ14982 345 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 LCN15Q6UWW0 184 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 ZNF431Q8TF32 576 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms