RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 LOC107984640A0A0U1RRK4 108 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TRDV1A0A1B0GX56 115 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 DPRXA6NFQ7 191 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM212A6NML5 194 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 BBIP1A8MTZ0 92 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF670-ZNF695F2Z2N8 137 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 H7BYZ3 331 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 LST1O00453 97 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 NPFFO15130 113 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CCL25O15444 150 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 LYZL6O75951 148 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 MT-ND4LP03901 98 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 APODP05090 189 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 PAEPP09466 180 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 AKAIN1P0CW23 69 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SMIM10L2AP0DMW4 78 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SMIM10L2BP0DMW5 78 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 LINC00694P0DN24 101 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 BCL2P10415 239 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H1BP16401 226 aaKnown RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SDC2P34741 201 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GUCA1AP43080 201 aaPredicted RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GNG4P50150 75 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 RAB5CP51148 216 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 COPZ1P61923 177 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CDK6Q00534 326 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CAV1Q03135 178 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 EIF3IQ13347 325 aaKnown RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 RTL8BQ17RB0 113 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 VMA21Q3ZAQ7 101 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CCSMST1Q4G0I0 132 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 HSD17B12Q53GQ0 312 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 COL5A1-AS1Q5SY13 56 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GLYATL3Q5SZD4 288 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 BCL2L15Q5TBC7 163 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM244Q5VVB8 128 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 Q5XG85 94 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GLT8D1Q68CQ7 371 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 Q6Q795 121 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GLIPR1L1Q6UWM5 242 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 Q6ZS49 121 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GTF2H5Q6ZYL4 71 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SSX8Q7RTT4 187 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 PRR15Q8IV56 129 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 C4orf33Q8N1A6 199 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 C9orf62Q8N4C0 152 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SLC22A24Q8N4F4 322 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 C12orf45Q8N5I9 185 aaPredicted RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 NUP35Q8NFH5 326 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 OR52R1Q8NGF1 315 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 OR5A2Q8NGI9 324 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 OR51A4Q8NGJ6 313 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 PPTC7Q8NI37 304 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 MRPL30Q8TCC3 161 aaKnown RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF418Q8TF45 676 aaPredicted RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM106AQ96A25 262 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 BORCS8Q96FH0 119 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CARD19Q96LW7 228 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 ERMAPQ96PL5 475 aaPredicted RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 GPX7Q96SL4 187 aaPredicted RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SLC25A21Q9BQT8 299 aaPredicted RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 RTL8AQ9BWD3 113 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 IMUPQ9GZP8 106 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 WDR61Q9GZS3 305 aaKnown RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 C11orf68Q9H3H3 251 aaKnown RBP0.56□□□□□ -2.32
CCDC39-206ENST00000489868 Q9H521 79 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SCN3BQ9NY72 215 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 OR5AC2Q9NZP5 309 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CKLFQ9UBR5 152 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 AK3Q9UIJ7 227 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 SCP2D1Q9UJQ7 156 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 HS3ST2Q9Y278 367 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 DISP2A7MBM2 1401 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TECPR2O15040 1411 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 NAIPQ13075 1403 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 FMN1Q68DA7 1419 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 ABCC10Q5T3U5 1492 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 RAPGEF2Q9Y4G8 1499 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 STRCQ7RTU9 1775 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MED12LQ86YW9 2145 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HECW2Q9P2P5 1572 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV30A0A087WSZ9 112 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 A0A0G2JMM0 328 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 PNMA8CA0A1B0GUJ8 204 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 FAM236AA0A1B0GUQ0 79 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 LOC100130705A0A1B0GUX0 176 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 FAM236BA0A1B0GV22 79 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 SPAARA0A1B0GVQ0 90 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 A0A1W2PPB8 328 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 ODAMA1E959 279 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TLCD2A6NGC4 264 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 GGT3PA6NGU5 568 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 IFITM5A6NNB3 132 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 KIR3DP1A8MWS1 328 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 C1orf196B1AJZ1 125 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 H3BQF6 201 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 I3L521 148 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM256-PLSCR3K7ERE1 68 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TAX1BP3O14907 124 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 OR2T1O43869 369 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms