RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 OR4E1P0C645 316 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF705DP0CH99 300 aaPredicted RBP5.07□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF705BP0CI00 300 aaPredicted RBP5.07□□□□□ -1.6
COL9A1-209ENST00000489861 PVALBP20472 110 aaPredicted RBP5.07□□□□□ -1.6
COL9A1-209ENST00000489861 DAD1P61803 113 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 RAB31Q13636 194 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 CDPF1Q6NVV7 123 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 GSG1LQ6UXU4 331 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 TMEM144Q7Z5S9 345 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 TMEM256Q8N2U0 113 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 Q8N3U1 123 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 OR10P1Q8NGE3 313 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 TMEM170AQ8WVE7 144 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 SMIM8Q96KF7 97 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 NPVFQ9HCQ7 196 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 PPP1R14DQ9NXH3 145 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 PSENENQ9NZ42 101 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 PRR13Q9NZ81 148 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 DOK5Q9P104 306 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 hCG_2014768A0A024R1R8 64 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 LOC102723971A0A1B0GUV8 181 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 SMCO3A2RU48 225 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 LYRM9A8MSI8 78 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 L7N2F9 121 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 TSC22D2O75157 780 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 IL5P05113 134 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 HTN3P15516 51 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 RPL7P18124 248 aaKnown RBP5.06□□□□□ -1.6
COL9A1-209ENST00000489861 VAMP2P63027 116 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 ID3Q02535 119 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF90Q03938 601 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 IAH1Q2TAA2 248 aaPredicted RBP5.06□□□□□ -1.6
COL9A1-209ENST00000489861 Q6ZRN7 208 aaPredicted RBP5.06□□□□□ -1.6
COL9A1-209ENST00000489861 LINC00299Q6ZSB3 139 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 ANAPC16Q96DE5 110 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 IGF2BP2-AS1Q96M15 143 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 CCDC32Q9BV29 185 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 GGACTQ9BVM4 153 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 RBM38Q9H0Z9 239 aaKnown RBP5.06□□□□□ -1.6
COL9A1-209ENST00000489861 DKK2Q9UBU2 259 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 HIGD1AQ9Y241 93 aa5.06□□□□□ -1.6
COL9A1-209ENST00000489861 IGKV1D-37A0A075B6S9 117 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 TMEM238LA0A1B0GVL6 79 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF98A6NK75 572 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 SSSCA1O60232 199 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 HYPMO75409 117 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 IGKV3-20P01619 116 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 ORM2P19652 201 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 CXCL2P19875 107 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 TSPOP30536 169 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 EMP1P54849 157 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 PLP1P60201 277 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 OR2F1Q13607 317 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 FAM222AQ5U5X8 452 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 MZT2BQ6NZ67 158 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 TEPPQ6URK8 271 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 CYP2G1PQ6ZSU1 146 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 ACOT7LQ6ZUV0 252 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF546Q86UE3 836 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 LRRC20Q8TCA0 184 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 MITD1Q8WV92 249 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 S100ZQ8WXG8 99 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 C20orf144Q9BQM9 153 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 SLC25A22Q9H936 323 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 LINC00588Q9Y4M8 146 aa5.05□□□□□ -1.6
COL9A1-209ENST00000489861 A0A0J9YX75 114 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 GOSR2O14653 212 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 LYRM1O43325 122 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 IFNA5P01569 189 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 PLA2G1BP04054 148 aaKnown RBP5.04□□□□□ -1.6
COL9A1-209ENST00000489861 IL7P13232 177 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 CCL18P55774 89 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 POLR2GP62487 172 aaKnown RBP eCLIP5.04□□□□□ -1.6
COL9A1-209ENST00000489861 HBG1P69891 147 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 HBG2P69892 147 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 BAK1Q16611 211 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 TTC32Q5I0X7 151 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 FAM78BQ5VT40 261 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 Q6ZRG5 221 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 CCDC28AQ8IWP9 274 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 ZBTB8BQ8NAP8 495 aaPredicted RBP5.04□□□□□ -1.6
COL9A1-209ENST00000489861 OR10J6PQ8NGY7 276 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 SLC50A1Q9BRV3 221 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 C20orf85Q9H1P6 137 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 GSKIPQ9P0R6 139 aa5.04□□□□□ -1.6
COL9A1-209ENST00000489861 YTHDF2Q9Y5A9 579 aaKnown RBP5.04□□□□□ -1.6
COL9A1-209ENST00000489861 LINC00854A0A1B0GVQ3 168 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 C5orf51A6NDU8 294 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 A8MTW9 85 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 PRSS46E5RG02 174 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 H3BP45 60 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 BOLA2-SMG1P6H3BVE0 249 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 K7EPK0 472 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 SOCS3O14543 225 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 GAS8-AS1O95177 125 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 ATP5G1P05496 136 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 OR5G3P0C626 314 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 LINC00869P0C866 280 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 DNAH10OSP0CZ25 163 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms