RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 PRNTQ86SH4 94 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 C14orf144Q96I85 54 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 PRO1933Q9H354 126 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-208ENST00000489611 H3BTX0 84 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 CTSGP08311 255 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 KIAA1644Q3SXP7 199 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-208ENST00000489611 C18orf32Q8TCD1 76 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 AJUBAQ96IF1 538 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 PSG8Q9UQ74 426 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 A0A1W2PS18 150 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 RAB4AP20338 218 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 AMTP48728 403 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 FBLN7Q53RD9 439 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 LINC00322Q6ZN03 302 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-208ENST00000489611 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 COX8CQ7Z4L0 72 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 SGK494Q96LW2 274 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 PIMREGQ9BSJ6 248 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
COL9A1-208ENST00000489611 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 CENPVL3A0A0U1RRI6 287 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-208ENST00000489611 HAX1O00165 279 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-208ENST00000489611 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-208ENST00000489611 CT45A10P0DMU9 189 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 COX6B1P14854 86 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 SAPCD1Q5SSQ6 148 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 UNQ5815/PRO19632Q6UWF5 114 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
COL9A1-208ENST00000489611 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-208ENST00000489611 CAMPP49913 170 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 PAX8Q06710 450 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 OR2D3Q8NGH3 330 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 ZNF502Q8TBZ5 544 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 FAM208BQ5VWN6 2430 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 OR2T8A6NH00 312 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 IGHV4-39P01824 125 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 NRGNQ92686 78 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 CCL19Q99731 98 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
COL9A1-208ENST00000489611 ABCA1O95477 2261 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 F2Z2F3 143 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 C15orf32Q32M92 178 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 GDF5OSQ5U4N7 250 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 MRPL52Q86TS9 123 aaKnown RBP11.67□□□□□ -0.54
COL9A1-208ENST00000489611 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 C17orf77Q96MU5 243 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 C20orf144Q9BQM9 153 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
COL9A1-208ENST00000489611 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 J3QKU1 62 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 HSBP1O75506 76 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 RIGQ13278 110 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 EEF1AKMT3Q96AZ1 226 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 ZC2HC1AQ96GY0 325 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 RCHY1Q96PM5 261 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 ZMAT5Q9UDW3 170 aaKnown RBP11.66□□□□□ -0.54
COL9A1-208ENST00000489611 AKAP6Q13023 2319 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 A0A087X0K7 114 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 CHEK1O14757 476 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
COL9A1-208ENST00000489611 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 C5orf56Q8N8D9 126 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 CHCHD1Q96BP2 118 aaKnown RBP11.66□□□□□ -0.54
COL9A1-208ENST00000489611 MOB4Q9Y3A3 225 aa11.66□□□□□ -0.54
COL9A1-208ENST00000489611 RHOGP84095 191 aa11.65□□□□□ -0.54
COL9A1-208ENST00000489611 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-208ENST00000489611 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
COL9A1-208ENST00000489611 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
COL9A1-208ENST00000489611 S4R3C0 116 aa11.65□□□□□ -0.54
COL9A1-208ENST00000489611 IGHV1-69DA0A0B4J2H0 117 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 SH2D7A6NKC9 451 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-208ENST00000489611 IGHV1-69P01742 117 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 PMCHP20382 165 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 MEGF9Q9H1U4 602 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
COL9A1-208ENST00000489611 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
COL9A1-208ENST00000489611 KRTDAPP60985 99 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 CLEC2AQ6UVW9 174 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 C10orf105Q8TEF2 133 aa11.64□□□□□ -0.55
COL9A1-208ENST00000489611 UTP20O75691 2785 aaKnown RBP11.64□□□□□ -0.55
COL9A1-208ENST00000489611 BRI3O95415 125 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms