RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 K7EQG2 157 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 OR10J4P0C629 311 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 PSMB3P49720 205 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 ZNF586Q9NXT0 402 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 ANK2Q01484 3957 aa10.43□□□□□ -0.74
C9orf3-221ENST00000489562 TRBV19A0A075B6N1 114 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 H3BQ15 152 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 ISLRO14498 428 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 ID1P41134 155 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 PPT1P50897 306 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 CMC4P56277 68 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-221ENST00000489562 PSG9Q00887 426 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 OXLD1Q5BKU9 147 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 SAMD5Q5TGI4 173 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 SUN5Q8TC36 379 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 SELENOKQ9Y6D0 94 aa10.42□□□□□ -0.74
C9orf3-221ENST00000489562 SOCS3O14543 225 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 EIF3GO75821 320 aaKnown RBP eCLIP10.41□□□□□ -0.74
C9orf3-221ENST00000489562 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-221ENST00000489562 SNRPD3P62318 126 aaKnown RBP10.41□□□□□ -0.74
C9orf3-221ENST00000489562 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 IQCF2Q8IXL9 164 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 C16orf92Q96LL3 132 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 C17orf77Q96MU5 243 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 FAM110AQ9BQ89 295 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 ZNF331Q9NQX6 463 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-221ENST00000489562 ZNF256Q9Y2P7 627 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-221ENST00000489562 ARL2-SNX15V9GYD0 113 aa10.41□□□□□ -0.74
C9orf3-221ENST00000489562 PKD1L1Q8TDX9 2849 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 TFPI2P48307 235 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 RAB14P61106 215 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 IFITM2Q01629 132 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 WFDC3Q8IUB2 231 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 BLNKQ8WV28 456 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 AAMDCQ9H7C9 122 aa10.4□□□□□ -0.74
C9orf3-221ENST00000489562 TRRAPQ9Y4A5 3859 aa10.39□□□□□ -0.75
C9orf3-221ENST00000489562 A0A1W2PRE2 83 aa10.39□□□□□ -0.75
C9orf3-221ENST00000489562 PMS2P11Q13670 270 aa10.39□□□□□ -0.75
C9orf3-221ENST00000489562 GTSCR1Q86UQ5 136 aa10.39□□□□□ -0.75
C9orf3-221ENST00000489562 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
C9orf3-221ENST00000489562 NKX6-2Q9C056 277 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-221ENST00000489562 PRELID1Q9Y255 219 aa10.39□□□□□ -0.75
C9orf3-221ENST00000489562 G3V4G9 280 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 H3BTX0 84 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 SLC17A3O00476 420 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 NDUFB4O95168 129 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 IFNA1P01562 189 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
C9orf3-221ENST00000489562 MRPL53Q96EL3 112 aaKnown RBP10.38□□□□□ -0.75
C9orf3-221ENST00000489562 TMPRSS5Q9H3S3 457 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 OTORQ9NRC9 128 aa10.38□□□□□ -0.75
C9orf3-221ENST00000489562 A0A1B0GV50 99 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 RGS13O14921 159 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 NMBP08949 121 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 TAGLN2P37802 199 aaKnown RBP10.37□□□□□ -0.75
C9orf3-221ENST00000489562 RANP62826 216 aaKnown RBP10.37□□□□□ -0.75
C9orf3-221ENST00000489562 PSG3Q16557 428 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 KPRPQ5T749 579 aaPredicted RBP10.37□□□□□ -0.75
C9orf3-221ENST00000489562 ARL6IP6Q8N6S5 226 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 Q9H3A6 140 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 MGAM2Q2M2H8 2515 aa10.37□□□□□ -0.75
C9orf3-221ENST00000489562 TRAV8-2A0A0B4J237 113 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 OR11H12B2RN74 326 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 CD81P60033 236 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 PSMG4Q5JS54 123 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 RXFP4Q8TDU9 374 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 LINC00052Q96N35 136 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 TCEAL7Q9BRU2 100 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 MAP6D1Q9H9H5 199 aa10.36□□□□□ -0.75
C9orf3-221ENST00000489562 PGPA6NDG6 321 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 FAM74A7A6NL05 159 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 CSN1S1P47710 185 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 CCL20P78556 96 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 ICAM4Q14773 271 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 CLLU1Q5K131 121 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 FAM24BQ8N5W8 94 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 C5orf17Q8NAS9 161 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 ZNF738Q8NE65 137 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
C9orf3-221ENST00000489562 PAGE4O60829 102 aa10.34□□□□□ -0.75
C9orf3-221ENST00000489562 CD7P09564 240 aa10.34□□□□□ -0.75
C9orf3-221ENST00000489562 DEFB131AP59861 70 aa10.34□□□□□ -0.75
C9orf3-221ENST00000489562 KRTAP10-11P60412 298 aa10.34□□□□□ -0.75
C9orf3-221ENST00000489562 UBE2G2P60604 165 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms